Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0743 ATGGTGAGGTTACTATTCCTCCTGTTCTTCTGTCTCTGGATTTCCACACAAGTGGGGGCTAGAACCGGAAGTATCATTACAAATAAGACTAAAGTACCTTCGAGGCCAAGTGTTGTGAAAATCGGAGCACTGCTTACTTTCCATTCGGTCATTGGAAAATCAGCAAAACCTGCAATTTTAGCTGCCATCGATGATGTTAATAATGATACAAGCATTCTTCCTGGTACTAAAATGGAAGTTATTTTACATGATACAAACTGCAGCGGGTTTCTCGGCACAGTGGAAGCTCTGGGGTTGATGGAGAATGACGTGGTTGCTGCTGTTGGTCCACAGTCATCTGGAATAGCTCATGTCATCTCCCATGTTGTTAATGAACTCCATGTGCCTCTCCTGTCATTTGGGGCTACAGACCCTACTCTTGCTTCTCTGCAGTACCCATATTTTGTCCGCACTACGCAGAATGACTATTTTCAGATGAACGCAATTGCAGACTTGATTGACTACTTTGGTTGGAAGGAGGTGATTGCTATCTTTGTGGATGATGATAATGGAAGAAATGGAATTTCTGCACTTGGTGATGCCCTTGCAAAGAAGCGTGCCAAGATCTCTTATAAGGCTGCCTTTACTGCTGGAGCCTCTACAAGTAATATCAGTGACTTGTTAAATGGGGTAAACTTAATGGAATCACGGGTCTATGTTGTCCACGTTAACCCTGATACTGGTTTGTCCATTTTTTCTATTGCGAAGAAAATTGGTATGATGGGCAATGGTTATGTTTGGATTGCAACAGATTGGCTTCCTTCGGTTCTAGATGCATCAGAAGCAGCTGATCCTGACACAATGAATGTCTTACAAGGGGTTATTGCTTTACGCCATCATACTCCTGACACTGATCTCAAGAAGAGGTTTATCTCTAGGCTTAAAAACAGTAAATACAAGGAGGACGCTACGAGCTTTAATTCCTATGCACTATATGCATATGATTCAGTTTGGTTAGCAGCACGAGCTTTTGATGCACTTCTCAATGAGGGAGGAAATGTATCTTTTAGTAATGACCCCAGATTGCATGGCACAAATGGAAGCACGTTGCATTTATCATCACTTCGTACTTTTGATGGTGGCCCACAGTTTCTCCAGAAAGTCCTGGCAATGAATTTCACCGGTCTGAGTGGTCAGATTCAGTTTGACGAGGACAAGAATTTAATTCATCCAGCATATGATATTCTAAACATTGGTGGATCTAGCCGTAGAATAGGTTATTGGTCTAATTACTCAGGTCTATCAGTTTTAGCACCTGAAATTTTATATACAAAACCACCTAACATTTCATCTAGCAATCAACATCTCTACGGTGTGATATGGCCGGGGGAGACTACAACAAGACCCCGTGGATGGGTGTTTCCCAACAATGGGAAGCCACTGCGAATAGCAGTACCAAACCGAATAAGCTATCTGGAGTTTGTTGCCAAAAACAAGAACCCTCCAGGAGTAAGAGGTTATTGCATTGATGTTTTTGAAGCAGCCTTAAACCTGCTTCCATATCCTGTCCCACGACAATATATATTATATGGAGATGGTCATAGAAATCCCAACTACGATGCACTTACGAATGAGGTTGCACAAAATAATTTTGATGCAGCTGTTGGAGATGTTACAATTGTCACAAACAGGACAAGGATTGTGGATTTTACTCAGCCTTTCGTGGAATCAGGGTTGGTTGTAGTTGTTGCTGTTAAGGAGGAGAAGTCAAGCCCTTGGTCATTTCTCAAACCATTCACTGCTCAAATGTGGTGTGTCACCGGTGCCTTCTTTCTCTTTGTGGGAGCTGTGGTATGGATTCTTGAGCACCGGCTCAATCATGAGTTCCGTGGTTCTCCAAGGAAACAACTTATGACCATTTTTTGGTTTAGCTTCTCCACGATGTTTTTCTCACATAGAGAAAACACTGTGAGCACTTTGGGGAGGTTGGTGTTACTGATATGGCTTTTTGTGGTATTAATCATCAATTCAAGCTACACTGCGAGCTTGACATCGATCCTCACAGTGCAGCAACTATCATCTCAAATTGAAGGAATTGACAGCTTGATTTCAAGCACTCAACCTATTGGAATTCAAGATGGGTCATTTGCACGGAAGTGCCTGATAGATGATCTGAATATAGCTGAATCTAGGATTGTGACGTTGAAAAACCAGCAGGATTATATTGATGCGCTTCAGCGTGGACCCAAGGGTGGAGGGGTGGTGGCAGTTGTTGACGAGCTTCCTTATATTGAGATATTGATGTCCAAAACTAATTGTAAATTCAGAACTGTAGGTCAGGAGTTCACTAAAAGTGGATGGGGATTTGCGTTCCAGAGGGACTCTCCCCTTTCTGTGGACTTGTCAACTGCCATTCTTCAGCTCTCAGAGAATGGCGATTTGCAGAAGATCCACGACAAATGGCTCTCAAAATTTACATGCGCTGCACAAGTCAATGATATTGATTCAAACAAGCTCTCTCTCAGTAGCTTCTGGGGCCTCTTCCTCATATGCGGGACTGCATGTTGCCTTGCTCTGGTCATATTCTGTATCAGGGTGTTCTGTCAATACATGAAATTTATCCCTGATGATGAGGAGGCTGAAGAGAATATTGAGCCAGTCAGAGCTAGAAGGACAAGTAGATCCACTAGCTTCAAGAACATATTTGGTTTTGTAGACAAAAGAGAAGCCGAAATAAAGGAGATATTGAAGCACAAGAATAAGAAACGGCGTCGCAGCCAGAGCGTAGACATGCACTCCAATTATTCAAACAGCTAA 2796 0.4263 MVRLLFLLFFCLWISTQVGARTGSIITNKTKVPSRPSVVKIGALLTFHSVIGKSAKPAILAAIDDVNNDTSILPGTKMEVILHDTNCSGFLGTVEALGLMENDVVAAVGPQSSGIAHVISHVVNELHVPLLSFGATDPTLASLQYPYFVRTTQNDYFQMNAIADLIDYFGWKEVIAIFVDDDNGRNGISALGDALAKKRAKISYKAAFTAGASTSNISDLLNGVNLMESRVYVVHVNPDTGLSIFSIAKKIGMMGNGYVWIATDWLPSVLDASEAADPDTMNVLQGVIALRHHTPDTDLKKRFISRLKNSKYKEDATSFNSYALYAYDSVWLAARAFDALLNEGGNVSFSNDPRLHGTNGSTLHLSSLRTFDGGPQFLQKVLAMNFTGLSGQIQFDEDKNLIHPAYDILNIGGSSRRIGYWSNYSGLSVLAPEILYTKPPNISSSNQHLYGVIWPGETTTRPRGWVFPNNGKPLRIAVPNRISYLEFVAKNKNPPGVRGYCIDVFEAALNLLPYPVPRQYILYGDGHRNPNYDALTNEVAQNNFDAAVGDVTIVTNRTRIVDFTQPFVESGLVVVVAVKEEKSSPWSFLKPFTAQMWCVTGAFFLFVGAVVWILEHRLNHEFRGSPRKQLMTIFWFSFSTMFFSHRENTVSTLGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGIQDGSFARKCLIDDLNIAESRIVTLKNQQDYIDALQRGPKGGGVVAVVDELPYIEILMSKTNCKFRTVGQEFTKSGWGFAFQRDSPLSVDLSTAILQLSENGDLQKIHDKWLSKFTCAAQVNDIDSNKLSLSSFWGLFLICGTACCLALVIFCIRVFCQYMKFIPDDEEAEENIEPVRARRTSRSTSFKNIFGFVDKREAEIKEILKHKNKKRRRSQSVDMHSNYSNS 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0743 931 FunFam Glutamate receptor 154 314 - -
Prci6g0743 931 Gene3D - 58 403 - -
Prci6g0743 931 CDD GluR_Plant 472 815 - -
Prci6g0743 931 Gene3D - 585 705 - -
Prci6g0743 931 Gene3D - 708 818 - -
Prci6g0743 931 SUPERFAMILY Periplasmic binding protein-like II 450 815 - -
Prci6g0743 931 Gene3D - 154 427 - -
Prci6g0743 931 SMART GluR_14 475 817 IPR001320 GO:0015276|GO:0016020
Prci6g0743 931 SUPERFAMILY Periplasmic binding protein-like I 34 466 IPR028082 -
Prci6g0743 931 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 889 IPR015683 -
Prci6g0743 931 MobiDBLite consensus disorder prediction 912 931 - -
Prci6g0743 931 PIRSF IGluLR_plant 1 931 IPR017103 -
Prci6g0743 931 Coils Coil 711 731 - -
Prci6g0743 931 Pfam Bacterial extracellular solute-binding proteins, family 3 529 816 IPR001638 -
Prci6g0743 931 Pfam Ligand-gated ion channel 817 848 IPR001320 GO:0015276|GO:0016020
Prci6g0743 931 Gene3D - 469 584 - -
Prci6g0743 931 FunFam Glutamate receptor 585 715 - -
Prci6g0743 931 CDD PBP1_GABAb_receptor_plant 40 429 IPR044440 -
Prci6g0743 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 243 266 - -
Prci6g0743 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 52 68 - -
Prci6g0743 931 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 112 140 - -
Prci6g0743 931 Pfam Receptor family ligand binding region 56 412 IPR001828 -
Prci6g0743 931 FunFam Glutamate receptor 711 819 - -
Prci6g0743 931 FunFam Glutamate receptor 469 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0743 Prci-Chr6 4966411 4971948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0743 35 782 Ion Channels AT1G05200 69.426 0.0 1134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0743 K05387 - qsa:O6P43_000581 1436.01