Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0733 ATGCGGAGGATGATTCACAGTGACGACGACTTCAGAGACCGAGTTGAGGACGCGGCAAACGCCGAGGCATCGACAGACGGCGAGGAGAAGCAGGGCATGAGGAAGGGGCCATGGACGGCGGCGGAGGACGCCCTTTTGATAGAGTACGTGAACAAGTACGGCGAGGGGAATTGGAATTCCGTGCAGAAGAACTGCGGGTTGACGAGATGCGGCAAAAGTTGCAGGCTGAGATGGGCCAACCACCTCAGACCCAATCTCAAGAAAGGTGCTTTCTCTGAGGGAGAAGAACAGTTCATCGTCGAGCTTCACGCCAAGCTCGGAAACAAATGGGCTCGCATGGCTTCCCTGTTACCTGGGCGAACTGACAATGAAATAAAGAATTTCTGGAACACGAGAGTGAAAAGACGCCAGAGAGCTGGGTTGCCTCTGTATCCTCCAGAACTCGAAGAAGAAGCTTCTCTGCATCATCTTAACCAAAACCACCAATACCATGCACCACCGCCTCTCCTATCTTCCTCCGACAAACTCCATAAGCTCACTGGCCAGCTAAGCAATTACGATTCTGCTGATACAACTCATGGCAGAAGCAATCAATGCCATCAAAACATGGGCTTCCCATTACTATCCTCCGTTTCGGCATACGGGTTTCAATATTCCGGTGGAACGATGACAGATATCTCTTCAACCCAATCGGAAACACCTCCTTCGTCCTACAGTACTACTAATGGGGTTCGCGGCTTGATGGGAGGTTCCACCATTGCTCCTGGCATTGACTACTATGATGTCGCGCCTTTGTCGCCATCAACAGAAGGAAACAGTGGGCTCCTGGATGCTGTACTGTTGGAGTCTCAAGATCTTTCTCGCAGGGACAGTCGCAAGTCCAAAACTAATGATTCTGATGCAGGAAGGAAGTTATCCATGAAGAGGAAACGCAATGCGGACGAGGAAGACAAAGACATTGAGCAATTGCAGTCAGATGGGAAGAATGGAGAATTCCCGAGAGATGATTTAAGCTCTCAATTATCCACAGAGAAGAAGGCAGTTGCGCTTGATGATCCATTGGACGGAATGAGTTCTATGGACGATGACTTGATTAGCTTGTTGAACAATTTTCCTTCAGAAATGCCGGTGCCTGATTGGTACCGGAAAGGAGAGAGACATGCTTTGGAGCTTGAAAATCAACAAGATACATCACTGGGCCGACCTGATCAGCAGCTCGCTTGGACCCTCGGAGGAACCTGTTGGAACGACTTGCCTAGTACATGTACATAA 1272 0.4969 MRRMIHSDDDFRDRVEDAANAEASTDGEEKQGMRKGPWTAAEDALLIEYVNKYGEGNWNSVQKNCGLTRCGKSCRLRWANHLRPNLKKGAFSEGEEQFIVELHAKLGNKWARMASLLPGRTDNEIKNFWNTRVKRRQRAGLPLYPPELEEEASLHHLNQNHQYHAPPPLLSSSDKLHKLTGQLSNYDSADTTHGRSNQCHQNMGFPLLSSVSAYGFQYSGGTMTDISSTQSETPPSSYSTTNGVRGLMGGSTIAPGIDYYDVAPLSPSTEGNSGLLDAVLLESQDLSRRDSRKSKTNDSDAGRKLSMKRKRNADEEDKDIEQLQSDGKNGEFPRDDLSSQLSTEKKAVALDDPLDGMSSMDDDLISLLNNFPSEMPVPDWYRKGERHALELENQQDTSLGRPDQQLAWTLGGTCWNDLPSTCT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0733 423 FunFam MYB-related transcription factor 34 87 - -
Prci6g0733 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 82 IPR017930 -
Prci6g0733 423 Gene3D - 35 87 - -
Prci6g0733 423 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Prci6g0733 423 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Prci6g0733 423 Gene3D - 90 136 - -
Prci6g0733 423 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 196 395 - -
Prci6g0733 423 MobiDBLite consensus disorder prediction 225 244 - -
Prci6g0733 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Prci6g0733 423 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Prci6g0733 423 MobiDBLite consensus disorder prediction 285 341 - -
Prci6g0733 423 MobiDBLite consensus disorder prediction 285 356 - -
Prci6g0733 423 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Prci6g0733 423 SUPERFAMILY Homeodomain-like 32 129 IPR009057 -
Prci6g0733 423 CDD SANT 37 82 IPR001005 -
Prci6g0733 423 SMART sant 34 84 IPR001005 -
Prci6g0733 423 SMART sant 87 135 IPR001005 -
Prci6g0733 423 FunFam Transcription factor GAMYB 90 136 - -
Prci6g0733 423 CDD SANT 90 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0733 Prci-Chr6 4885405 4887851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0733 31 152 MYB Transcription Factor Family AT5G06100 77.869 5.72e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci6g0733 Myb_DNA-binding 4.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0733 K09422 - gmx:100784779 376.326