Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0728 ATGGGGCTGGTAAAGGCTGCCATGGGAGACGCCATTCTAACGTCAATATGGGTTTTCAGCGTCTCAACTCTCCGAATCCTCAGTTCTCAAGTTGCCTCCTTCCTAGACCTCCACCCTTCTTCGCTCGCCGGCCTCTTCATCACCACCGTCATCTCCACTATTCTGGTCTTCACTATCAGTCTCATCGGCAGAATCCTTGGCGGCGCTAGCTTCAACCCCTCCACCACTGTCTCCTTTTATGCCGCCGGGCTCCGACCCGACTCTTCTCTGAACTCCATGGCCATCCGATTCCCTGCTCAGGCGGCAGGCGGGGTCGCCGGAGCTCGTGCTATTCTGCACCTCATCCCCACCCAGTACAAATCCACGCTTAAAGGCCCTTCCTTGAAAGTGGATTTGCATACCGGGGCCATAGCAGAGGGAGCGTTGACTTTCGCTCTCAACTTGACTATTCTTCTTGTTATGCTTAAAGGTCCTAAGAACCCTCTGTTGAAGGTTTATTTGATTTCTGTGGCAACAGTATCTCTGGTTATTGCTGGTTCTGCGTATACAGGACCTTCTATGAACCCTGCTAATGCATTTGGATGGGCTTACATTAACAACAGGCACAACACTTGGGAGCAGTTCTATGTTTATTGGATATGTCCTTTCATTGGGGCTACTCTTGCTGCTTCCGTCTATCGATTTCTCTTCATGTCACCGGTCAAGCAGAAGAAAGCCTGA 720 0.5083 MGLVKAAMGDAILTSIWVFSVSTLRILSSQVASFLDLHPSSLAGLFITTVISTILVFTISLIGRILGGASFNPSTTVSFYAAGLRPDSSLNSMAIRFPAQAAGGVAGARAILHLIPTQYKSTLKGPSLKVDLHTGAIAEGALTFALNLTILLVMLKGPKNPLLKVYLISVATVSLVIAGSAYTGPSMNPANAFGWAYINNRHNTWEQFYVYWICPFIGATLAASVYRFLFMSPVKQKKA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0728 239 FunFam Aquaporin SIP1-1 1 239 - -
Prci6g0728 239 Gene3D Glycerol uptake facilitator protein. 1 238 IPR023271 -
Prci6g0728 239 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0728 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0728 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0728 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0728 239 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0728 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0728 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Prci6g0728 239 SUPERFAMILY Aquaporin-like 3 233 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0728 Prci-Chr6 4820692 4821904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0728 1 230 Major Intrinsic Protein MIP AT3G04090 48.261 7.80e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0728 K09875 - qsa:O6P43_000566 372.859