Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0722 ATGGATTGGAGCAGAGGCCGTATCTTAGGCCACGGCTCCTCCGCCACCGTCTCTCTTGCCTCCTCCTGCCGCTCCGACCTCGTCTTCGCCGTCAAGTCATCGGAGCTGTCTCGCTCTCTGTTCTTACAGAGAGAACAGAGCATCCTATCTACTGTATCCTCTCCTTATATTGTCGCCTATAAAGGGTGTGATGTTACTCGAGAGAATAACAAGCTCTTTTACAACCTCTTCATGGAATACATGCCCTTTGGTAATATTCTTCAGGCGGTTCAACGGCACGGCGGCCACCTCGACTTGGGTTTCGTCGGCTGCTACACGTGGCAGATTTTGCAGGGGCTGGAGTATTTACATTCCAACGGGCTGGTACATTGTGACATTAAGAGCACCAACGTATTGATTGGTGAAGATGGAGCGAAGATCTCGGATTTCGGATGTGCCAAGCGTGTTGATGACACGGCAGCGCCGACCAGCGGGACGCCCATGTTTATGGCGCCGGAGGTGGCGCGTGGGGAAGAACAGGGGTGTGCTGGTGATATTTGGGCACTTGGGTGCACAGTGATGGAAATGGCTTCTGGGATTTCACCGTGGCCGAACGCTGCGGAGCCTTACTCTGTTCTTCATCGGATTGCTTGTTCTGGCGAGAGACCGGAGATTCCAGGGTTACTACCGGAGGAAGCAAAGGATTTCTTGGACAAGTGCTTGAAGAGGAATCCGAAAGAGAGATGGACGGCTACTCAACTGTTAAACCACCCATTCGTCACGGAATTCAATTCGAAATCCGCCGTGAATGAAATTCAAAAACTCAATTCGAGTTCACCCACATGCGTCCTTGAGCAAGGGTTTTGGAATTCCATGGAGGAATCGGAAACTCACGGGATTTTGATTCGCACGAAGTTTGAAAACACAGCTGCTGATAGAATCAAAAGGTTGGCTGAGTTCTCAGGGGAACCCAGATGGACACGTGATGATAATTGGATCACAATCAGAGGAACCGATGAAGCGTCAGCTTCAATCAGTGACGATGGTTTGGAAGAGTCGGTGACAAGCAACGTTAGAAGTAGGATTAGTGGGTGTTTCAGCCGAAATTACTAA 1092 0.5027 MDWSRGRILGHGSSATVSLASSCRSDLVFAVKSSELSRSLFLQREQSILSTVSSPYIVAYKGCDVTRENNKLFYNLFMEYMPFGNILQAVQRHGGHLDLGFVGCYTWQILQGLEYLHSNGLVHCDIKSTNVLIGEDGAKISDFGCAKRVDDTAAPTSGTPMFMAPEVARGEEQGCAGDIWALGCTVMEMASGISPWPNAAEPYSVLHRIACSGERPEIPGLLPEEAKDFLDKCLKRNPKERWTATQLLNHPFVTEFNSKSAVNEIQKLNSSSPTCVLEQGFWNSMEESETHGILIRTKFENTAADRIKRLAEFSGEPRWTRDDNWITIRGTDEASASISDDGLEESVTSNVRSRISGCFSRNY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0722 363 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Prci6g0722 363 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Prci6g0722 363 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0722 363 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0722 363 CDD STKc_MAPKKK 2 253 - -
Prci6g0722 363 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0722 363 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
Prci6g0722 363 SUPERFAMILY Protein kinase-like (PK-like) 2 265 IPR011009 -
Prci6g0722 363 Gene3D Transferase(Phosphotransferase) domain 1 2 316 - -
Prci6g0722 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Prci6g0722 363 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0722 Prci-Chr6 4788182 4789503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0722 1 285 MAP Kinase Kinase Kinase AT2G32510 56.701 1.58e-110 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci6g0722 Pkinase 5.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0722 K20716 - cave:132182830 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2282 7 36078146 36079490 Prci6g0722 6 4788182 4789503 CCT
Prci6g0722 6 4788182 4789503 Prci6g0722 6 4788182 4789503 ECH