Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0720 ATGGCCAGAGCGTGTGGACTCTACATTGATTCAGATCCAGCTGCGAGCGCCTTCTTCCTCAACTCTCTCCGTCCTCAAGACGCCCTTCAACCTCCCATGGACTCTTCCATCCCTTTCCACGAGATGGACTTCTTCTCCAACAACCCTTCCTCTGCCTCTGCCAACGCCGATTCCTCCACCCCTCCCCATCCCCTTCCCTTCCAAGTAAACACTGGCCTCAATCTCTTAACCACTAACAGCGACCAATCCGTGGCCGATGATGCGCTGGCCATATATTCTAATTTTAAGGAGAAACGAATCAAGACTGAGCTGAGAAATCTAGATACTGAGATTGCTGTTCTTCGGGGTGAGTTAGAGAAGATAGTGGAAGAGAATCATAAGCTGAAAGACATGATAAATGAGACTAACGCCAATTACAACGCGCTCAAGATGCGAATTATAGAACCTCGCAAGGGAGGTGAGGACGCTGAGAAACCTGCACACCAAGTGCTTGGTGCGAGTCCAGAGGAAAAGAAACAAGCTGAGAATAGCAGAGGAACCTTGGTGCCGAGGCAATTTATAGACCTTGGATTAGCTTCAATCGATGATGGCGAGGCCAACAGTGATGAGCACTCGCTTTCTCCGTCCGTAAGGAGAAGCAACGGCAGATCAAGATCACCCATGGAAGTGGAATGCAGCACCAGGATTGGGTCCGACGCGAAGGAATTGAACAAAGAAGCTGAAATTGAAGAGGAAGCTGAAAGGATTCAAAAGTATAGTCCTCCGAAAAACGTTGATGATCAAGTGGAAGCCACTATGAGGAGGGCAAGAGTTTCAGTTAGAGCTCGATCAGAAGCCCCTATGATCACTGATGGATGTCAATGGAGAAAATATGGACAGAAGATGGCGAAAGGGAATCCATGCCCTCGAGCTTATTATCGTTGTACCATGGCTGCAGGTTGTCCCGTTAGGAAACAGGTGCAAAGGTGTGCAGAGGACCGAACAATCTTGGTGACAACGTACGAAGGAAATCATAACCACGCCCTGCCTCCAGCAGCAATGGCGATGGCACAAACAACATCATCAGCGGCAAAGATGTTGCTTTCAGGATCAATGTCGAGCAATGATGGTCTGATGAATGCGAGCTTCTTGACGAGGACGACATTGCTTCCTTGTTCTTCAAGTAACATGGCGACTCTCTCAGCCTCAGCTCCATTTCCGACTGTAACATTGGACTTGACTCACCCACCAACAACACAGCCATCCACCCAATTTCAAATGCCTTTCTCAAATCATGCCTCTCATGGTTTCACTCAGGTTTTGGCTCAAGCACTTTGTAACAGCCAGTCAAATTTCTCAGGGCTTCAAGTGAATAACAAAGACCCTCTGCAACTAAGTGCTGCTATAGCAGCTGACCCTAACTTCACGGCAGCGTTAACGGCCGCTATTACGTCGATCATGGGTTCTGCGCTGCCCAGTAACGTTAATGGTGACAATAATAATGGCAATGTTACGAGTAGCAATAACAATGATTCCAAATTTTCAGGCAACTAG 1533 0.4788 MARACGLYIDSDPAASAFFLNSLRPQDALQPPMDSSIPFHEMDFFSNNPSSASANADSSTPPHPLPFQVNTGLNLLTTNSDQSVADDALAIYSNFKEKRIKTELRNLDTEIAVLRGELEKIVEENHKLKDMINETNANYNALKMRIIEPRKGGEDAEKPAHQVLGASPEEKKQAENSRGTLVPRQFIDLGLASIDDGEANSDEHSLSPSVRRSNGRSRSPMEVECSTRIGSDAKELNKEAEIEEEAERIQKYSPPKNVDDQVEATMRRARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHALPPAAMAMAQTTSSAAKMLLSGSMSSNDGLMNASFLTRTTLLPCSSSNMATLSASAPFPTVTLDLTHPPTTQPSTQFQMPFSNHASHGFTQVLAQALCNSQSNFSGLQVNNKDPLQLSAAIAADPNFTAALTAAITSIMGSALPSNVNGDNNNGNVTSSNNNDSKFSGN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0720 510 ProSiteProfiles WRKY domain profile. 277 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci6g0720 510 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 101 493 IPR044810 GO:0003700
Prci6g0720 510 SMART WRKY_cls 282 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci6g0720 510 MobiDBLite consensus disorder prediction 487 510 - -
Prci6g0720 510 Gene3D WRKY domain 267 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci6g0720 510 Pfam WRKY DNA -binding domain 284 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci6g0720 510 MobiDBLite consensus disorder prediction 228 248 - -
Prci6g0720 510 SUPERFAMILY WRKY DNA-binding domain 275 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci6g0720 510 Coils Coil 97 145 - -
Prci6g0720 510 MobiDBLite consensus disorder prediction 150 180 - -
Prci6g0720 510 MobiDBLite consensus disorder prediction 203 221 - -
Prci6g0720 510 MobiDBLite consensus disorder prediction 195 248 - -
Prci6g0720 510 FunFam probable WRKY transcription factor 31 267 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0720 Prci-Chr6 4762089 4764944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0720 34 494 WRKY Transcription Factor Family AT1G62300 45.509 4.90e-110 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci6g0720 WRKY 5.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0720 - - pcin:129313060 917.531