Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0719 ATGGCCAGAGCGTGTGGACTCTACATTGATTCAGATCCAGCTGCGAGCGCCTTCTTCCTCAACTCTCTCCGTCCTCAAGACGCCCTTCAACCTCCCATGGACTCTTCCATCCCTTTCCACGAGATGGACTTCTTCTCCAACAACCCTTCCTCTGCCTCTGCCAACGCCGATTCCTCCACCCCTCCCCATCCCCTTCCCTTCCAAGTAAACACTGGCCTCAATCTCTTAACCACTAACAGCGACCAATCCGTGGCCGATGATGCGCTGGCCATATATTCTAATTTTAAGGAGAAACGAATCAAGACTGAGCTGAGAAATCTAGATGTAACAACTGAGATTGCTGTTCTTCGGGGTGAGTTAGAGAAGATAGTGGAAGAGAATCATAAGCTGAAAGACATGATAAATGAGACTAACGCCAATTACAACGCGCTCAAGATGCGAATTATAGAACCTCGCAAGGGAGGTGAGGACGCTGAGAAACCTGCACACCAAGTGCTTGGTGCGAGTCCAGAGGAAAAGAAACAAGCTGAGAATAGCAGAGGAACCTTGGTGCCGAGGCAATTTATAGACCTTGGATTAGCTTCAATCGATGATGGCGAGGCCAACAGTGATGAGCACTCGCTTTCTCCGTCCGTAAGGAGAAGCAACGGCAGATCAAGATCACCCATGGAAGTGGAATGCAGCACCAGGATTGGGTCCGACGCGAAGGAATTGAACAAAGAAGCTGAAATTGAAGAGGAAGCTGAAAGGATTCAAAAGTATAGTCCTCCGAAAAACGTTGATGATCAAGTGGAAGCCACTATGAGGAGGGCAAGAGTTTCAGTTAGAGCTCGATCAGAAGCCCCTATGATCACTGATGGATGTCAATGGAGAAAATATGGACAGAAGATGGCGAAAGGGAATCCATGCCCTCGAGCTTATTATCGTTGTACCATGGCTGCAGGTTGTCCCGTTAGGAAACAGGTGCAAAGGTGTGCAGAGGACCGAACAATCTTGGTGACAACGTACGAAGGAAATCATAACCACGCCCTGCCTCCAGCAGCAATGGCGATGGCACAAACAACATCATCAGCGGCAAAGATGTTGCTTTCAGGATCAATGTCGAGCAATGATGGTCTGATGAATGCGAGCTTCTTGACGAGGACGACATTGCTTCCTTGTTCTTCAAGTAACATGGCGACTCTCTCAGCCTCAGCTCCATTTCCGACTGTAACATTGGACTTGACTCACCCACCAACAACACAGCCATCCACCCAATTTCAAATGCCTTTCTCAAATCATGCCTCTCATGGTTTCACTCAGGTTTTGGCTCAAGCACTTTGTAACAGCCAGTCAAATTTCTCAGGGCTTCAAGTGAATAACAAAGACCCTCTGCAACTAAGTGCTGCTATAGCAGCTGACCCTAACTTCACGGCAGCGTTAACGGCCGCTATTACGTCGATCATGGGTTCTGCGCTGCCCAGTAACGTTAATGGTGACAATAATAATGGCAATGTTACGAGTAGCAATAACAATGATTCCAAATTTTCAGGCAACTAG 1539 0.4782 MARACGLYIDSDPAASAFFLNSLRPQDALQPPMDSSIPFHEMDFFSNNPSSASANADSSTPPHPLPFQVNTGLNLLTTNSDQSVADDALAIYSNFKEKRIKTELRNLDVTTEIAVLRGELEKIVEENHKLKDMINETNANYNALKMRIIEPRKGGEDAEKPAHQVLGASPEEKKQAENSRGTLVPRQFIDLGLASIDDGEANSDEHSLSPSVRRSNGRSRSPMEVECSTRIGSDAKELNKEAEIEEEAERIQKYSPPKNVDDQVEATMRRARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHALPPAAMAMAQTTSSAAKMLLSGSMSSNDGLMNASFLTRTTLLPCSSSNMATLSASAPFPTVTLDLTHPPTTQPSTQFQMPFSNHASHGFTQVLAQALCNSQSNFSGLQVNNKDPLQLSAAIAADPNFTAALTAAITSIMGSALPSNVNGDNNNGNVTSSNNNDSKFSGN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0719 512 MobiDBLite consensus disorder prediction 152 182 - -
Prci6g0719 512 MobiDBLite consensus disorder prediction 205 223 - -
Prci6g0719 512 FunFam probable WRKY transcription factor 31 269 346 - -
Prci6g0719 512 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 106 495 IPR044810 GO:0003700
Prci6g0719 512 SMART WRKY_cls 284 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci6g0719 512 SUPERFAMILY WRKY DNA-binding domain 277 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci6g0719 512 Pfam WRKY DNA -binding domain 286 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci6g0719 512 MobiDBLite consensus disorder prediction 197 250 - -
Prci6g0719 512 ProSiteProfiles WRKY domain profile. 279 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci6g0719 512 MobiDBLite consensus disorder prediction 489 512 - -
Prci6g0719 512 Gene3D WRKY domain 269 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci6g0719 512 MobiDBLite consensus disorder prediction 230 250 - -
Prci6g0719 512 Coils Coil 113 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0719 Prci-Chr6 4762088 4764944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0719 34 496 WRKY Transcription Factor Family AT1G62300 45.328 7.44e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci6g0719 WRKY 5.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0719 - - pcin:129313060 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2283 7 36087664 36090057 Prci6g0719 6 4762088 4764944 CCT
Prci6g0719 6 4762088 4764944 Prci6g0719 6 4762088 4764944 ECH