Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0705 ATGTACAACGCTGTGATGGATCCTGAGTTGATCAGAATCGCTCAGGAGCAGATGAGTCGCATGTCACCGGCTGAATTTGCTCGGATCCAACAGCAGATGATGTCCAATCCAGAGTTAATGAGGATGGCCTCAGAAAGCATGAAGAACATGAGGTCTGAAGACTTTAAACTAGCTGCAGAGCAGCTAAAGCATACTCGTCCTGAACAGATGGCTGAGATTGGTGAGAAGATGGCAAATGCAACACCTCAAGAAATTGCAGCTATGCGTGCCCGTGCTGATGCCCAGATTAAATATGAAATAACTGCGGCTGAGATGTTGAAGAAGCAGGGTAATGATCTTCACAGTCAGGGAAGATTCCATGAAGCTATGCAGAAGTATTGTCTTGCCAAGCAAAACATAAGAGAAATTCCATCCTCCCAAAGTAGAAAGCTTCTTTTAGCTTGCTCGCTCAACTTGATGTCGTGTTACTTGAAGACAGGGCAGTATGATGAATGTGTAAAAGAAGGTGCTGAGGTTTTGGCTTATGATGCAAAAAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTTGGTCTACTAAAGGATGCTGTTGATGATTTGAGCATGGCATATGAAGTTTGCCCAAGTGATGATACAGTTGCAAAGCTTTTAAGGGAGACCAAGGAAATTTTGGCAGAGGATGGTGGTGAGCATGCACCTAGAGGATTGGTAATTGAAGAAATAACTGAAGAAGATCAGAATGTCCGGGCACAAAACTCTGAAAGCTCATCTGTGGAGCAAACAGTGGCTTGGCCAAAAACTTCCAACGAGTCTTCCAAGAGTTCCAGTACAGTTATCAATGAAAATCTAGAATCAAATATGGAGAGATCATTCCAAAATTTCATTTCAAATGCCAACCCTGCCACTCTTGCTTCTTTGAATGCTGGACAGTCCAAAGATGTGTCTCCCGATATGATTAGAACTGCCTCAAACATGATTAGCAAGATGTCACCACAGGAACTTCAAAAAATGCTTGACATGGCTTCTTCATATCAGGGGGACAACCCATTTTTAAGAGGTTCCCCTGAATCTACTATCAACTCTGGATCAATTCCTCCAAACGTGACTCCTGACATGTTTAAAACAGCTTCTGATATGATAAGTAAAATGCCACCAGAGGATCTTCAGAAGATGTTTGAAATGGCTTCCTCATTGTCCGGGAAAGCATCTAGCTCATCATCCGCAGCTGTGGACAAGAATGTGAGAAATGCTTCTCAGTCGAACATCCCCTCCTCCAATGCTAGTGGAAGCAATGCATTTGCTGAATCAAGTTCTTATGATTCATTTTTAAATATGGGAAACGCTGCTCAGTCAAACTTCCCATCCTCAAGTGCTGATTTGCAAGAACAGATGAGAAACCAGATGAGAGATCCAGCTACGCGAGAGATGTTTACATCAATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGAGCAAACAATTTGGTGTTAAGCTTTCAAAAGAAGATGCAGCAAAAGCTCAGCAAACCATGTCATCCTTGACACCAGAGGACTTGGATAGAATGATGCGATGGGCTGATCGGATTCAAAGAGGAGTTGAAGGTGCAAAAAAGACGAAGAATTGGCTGCTCGGAAAACCTGGTATGATATTGGCAATAGTCATGCTCATATTAGCTGCAATCCTTCACTGGCAGGGTTTCATTGGTGGCTAG 1725 0.4255 MYNAVMDPELIRIAQEQMSRMSPAEFARIQQQMMSNPELMRMASESMKNMRSEDFKLAAEQLKHTRPEQMAEIGEKMANATPQEIAAMRARADAQIKYEITAAEMLKKQGNDLHSQGRFHEAMQKYCLAKQNIREIPSSQSRKLLLACSLNLMSCYLKTGQYDECVKEGAEVLAYDAKNLKALYRRGQAYKELGLLKDAVDDLSMAYEVCPSDDTVAKLLRETKEILAEDGGEHAPRGLVIEEITEEDQNVRAQNSESSSVEQTVAWPKTSNESSKSSSTVINENLESNMERSFQNFISNANPATLASLNAGQSKDVSPDMIRTASNMISKMSPQELQKMLDMASSYQGDNPFLRGSPESTINSGSIPPNVTPDMFKTASDMISKMPPEDLQKMFEMASSLSGKASSSSSAAVDKNVRNASQSNIPSSNASGSNAFAESSSYDSFLNMGNAAQSNFPSSSADLQEQMRNQMRDPATREMFTSMIKNMSPEMMANMSKQFGVKLSKEDAAKAQQTMSSLTPEDLDRMMRWADRIQRGVEGAKKTKNWLLGKPGMILAIVMLILAAILHWQGFIGG 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0705 574 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Prci6g0705 574 SUPERFAMILY TPR-like 96 223 IPR011990 GO:0005515
Prci6g0705 574 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 5 352 - -
Prci6g0705 574 SMART tpr_5 103 136 IPR019734 GO:0005515
Prci6g0705 574 SMART tpr_5 180 213 IPR019734 GO:0005515
Prci6g0705 574 SMART tpr_5 146 179 IPR019734 GO:0005515
Prci6g0705 574 MobiDBLite consensus disorder prediction 249 281 - -
Prci6g0705 574 Gene3D Tetratricopeptide repeat domain 91 234 IPR011990 GO:0005515
Prci6g0705 574 MobiDBLite consensus disorder prediction 251 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0705 Prci-Chr6 4655717 4661883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0705 100 229 Calmodulin-binding Proteins AT5G48570 33.824 3.86e-12 67.0