Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0695 ATGTCAATGGAAATGATGGCAGCCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAGCGGTTTACCGACCATAGTGACGGTTAGATGCGGACATTGTGCCAATTTGCTATCAGTTAACGTGGGTGCTTCACTTCAAGCGTTTCCTCCTCATCAGAGTCACCCTCAGCCACAGAAGCAGCATCTGACTTTTGAAGAACCAAGCAACAAAGATCTGGGATCATCTTCAAAATGCAGCAAATTAGGTCCATTTGAGTCTGTAGAGAATGAGCAACCTAGGATTCCTCCCATTCGGCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGCAATCCTGACATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGATTGAAGCTGGATGGAAACAAGCAAGCCAAGCTGGACCTTGGGGAGGGAACTCAAAAGTCTAATGGGTTCTACTGA 555 0.4595 MSMEMMAAERVCYVHCNFCNTILAVSVPCSGLPTIVTVRCGHCANLLSVNVGASLQAFPPHQSHPQPQKQHLTFEEPSNKDLGSSSKCSKLGPFESVENEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDLGEGTQKSNGFY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0695 184 CDD HMG-box_SF 115 151 - -
Prci6g0695 184 MobiDBLite consensus disorder prediction 58 92 - -
Prci6g0695 184 SUPERFAMILY HMG-box 106 154 IPR036910 -
Prci6g0695 184 Pfam YABBY protein 7 161 IPR006780 GO:0007275
Prci6g0695 184 MobiDBLite consensus disorder prediction 58 116 - -
Prci6g0695 184 Gene3D High mobility group box domain 98 157 IPR036910 -
Prci6g0695 184 PANTHER PROTEIN YABBY 6-RELATED 1 170 IPR006780 GO:0007275
Prci6g0695 184 FunFam Axial regulator YABBY 106 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0695 Prci-Chr6 4595692 4601745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0695 1 184 C2C2-YABBY Transcription Factor Family AT1G08465 66.845 5.22e-83 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci6g0695 YABBY 2e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0695 K25796 - gmx:100500091 300.056