Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0694 ATGTCAATGGAAATGATGGCAGCCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAGCGGTTTACCGACCATAGTGACGGTTAGATGCGGACATTGTGCCAATTTGCTATCAGTTAACGTGGGTGCTTCACTTCAAGCGTTTCCTCCTCATCAGAGTCACCCTCAGAAGCAGCATCTGACTTTTGAAGAACCAAGCAACAAAGATCTGGGATCATCTTCAAAATGCAGCAAATTAGGTCCATTTGAGTCTGTAGAGAATGAGCAACCTAGGATTCCTCCCATTCGGCTTATGATCAATATTGCAGCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGCAATCCTGACATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGATTGAAGCTGGATGGAAACAAGCAAGCCAAGCTGGACCTTGGGGAGGGAACTCAAAAGTCTAATGGGTTCTACTGA 567 0.4515 MSMEMMAAERVCYVHCNFCNTILAVSVPCSGLPTIVTVRCGHCANLLSVNVGASLQAFPPHQSHPQKQHLTFEEPSNKDLGSSSKCSKLGPFESVENEQPRIPPIRLMINIAAPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDLGEGTQKSNGFY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0694 188 CDD HMG-box_SF 119 155 - -
Prci6g0694 188 MobiDBLite consensus disorder prediction 60 84 - -
Prci6g0694 188 SUPERFAMILY HMG-box 111 158 IPR036910 -
Prci6g0694 188 Gene3D High mobility group box domain 111 161 IPR036910 -
Prci6g0694 188 FunFam Axial regulator YABBY 110 182 - -
Prci6g0694 188 Pfam YABBY protein 7 165 IPR006780 GO:0007275
Prci6g0694 188 PANTHER PROTEIN YABBY 6-RELATED 1 174 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0694 Prci-Chr6 4595692 4601745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0694 1 188 C2C2-YABBY Transcription Factor Family AT1G08465 64.767 2.18e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci6g0694 YABBY 9e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0694 K25796 - gmx:100500091 310.457