Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0693 ATGTCAATGGAAATGATGGCAGCCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAGCGGTTTACCGACCATAGTGACGGTTAGATGCGGACATTGTGCCAATTTGCTATCAGTTAACGTGGGTGCTTCACTTCAAGCGTTTCCTCCTCATCAGAGTCACCCTCAGAAGCAGCATCTGACTTTTGAAGAACCAAGCAACAAAGATCTGGGATCATCTTCAAAATGCAGCAAATTAGGTCCATTTGAGTCTGTAGAGAATGAGCAACCTAGGATTCCTCCCATTCGGCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGCAATCCTGACATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGATTGAAGCTGGATGGAAACAAGCAAGCCAAGCTGGACCTTGGGGAGGGAACTCAAAAGTCTAATGGGTTCTACTGA 549 0.4572 MSMEMMAAERVCYVHCNFCNTILAVSVPCSGLPTIVTVRCGHCANLLSVNVGASLQAFPPHQSHPQKQHLTFEEPSNKDLGSSSKCSKLGPFESVENEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDLGEGTQKSNGFY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0693 182 CDD HMG-box_SF 113 149 - -
Prci6g0693 182 FunFam Axial regulator YABBY 104 176 - -
Prci6g0693 182 PANTHER PROTEIN YABBY 6-RELATED 1 168 IPR006780 GO:0007275
Prci6g0693 182 Pfam YABBY protein 7 159 IPR006780 GO:0007275
Prci6g0693 182 MobiDBLite consensus disorder prediction 75 90 - -
Prci6g0693 182 MobiDBLite consensus disorder prediction 59 114 - -
Prci6g0693 182 Gene3D High mobility group box domain 96 155 IPR036910 -
Prci6g0693 182 SUPERFAMILY HMG-box 104 152 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0693 Prci-Chr6 4595692 4601745 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0693 1 182 C2C2-YABBY Transcription Factor Family AT1G08465 67.380 4.71e-82 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci6g0693 YABBY 3.8e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0693 K25796 - gmx:100500091 307.375