Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0692 ATGTCAATGGAAATGATGGCAGCCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAGCGGTTTACCGACCATAGTGACGGTTAGATGCGGACATTGTGCCAATTTGCTATCAGTTAACGTGGGTGCTTCACTTCAAGCGTTTCCTCCTCATCAGAGTCACCCTCAGCCACAGAAGCAGCATCTGACTTTTGAAGAACCAAGCAACAAAGATCTGGGATCATCTTCAAAATGCAGCAAATTAGGTCCATTTGAGTCTGTAGAGAATGAGCAACCTAGGATTCCTCCCATTCGGCTTATGATCAATATTGCAGCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGCAATCCTGACATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGATTGAAGCTGGATGGAAACAAGCAAGCCAAGCTGGACCTTGGGGAGGGAACTCAAAAGTCTAATGGGTTCTACTGA 573 0.4538 MSMEMMAAERVCYVHCNFCNTILAVSVPCSGLPTIVTVRCGHCANLLSVNVGASLQAFPPHQSHPQPQKQHLTFEEPSNKDLGSSSKCSKLGPFESVENEQPRIPPIRLMINIAAPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDLGEGTQKSNGFY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0692 190 CDD HMG-box_SF 121 157 - -
Prci6g0692 190 MobiDBLite consensus disorder prediction 58 86 - -
Prci6g0692 190 FunFam Axial regulator YABBY 112 184 - -
Prci6g0692 190 Pfam YABBY protein 7 167 IPR006780 GO:0007275
Prci6g0692 190 PANTHER PROTEIN YABBY 6-RELATED 1 176 IPR006780 GO:0007275
Prci6g0692 190 SUPERFAMILY HMG-box 113 160 IPR036910 -
Prci6g0692 190 Gene3D High mobility group box domain 112 162 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0692 Prci-Chr6 4595692 4602001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0692 1 190 C2C2-YABBY Transcription Factor Family AT1G08465 64.249 2.88e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci6g0692 YABBY 5e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0692 K25796 - gmx:100500091 303.138