Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0679 ATGGGTGTCTCGGGGAAGTGGATTAAAGCTTTGGTGGGTCTAAAGAAATCTGAAAAGGCAGAGTCTTCAGATAAGGATGTAAATAGAATTGGAAAAATACGGCACAGAAGGAAACAATCCATTGATGGTGACAATGAAAAACTCCAGAATGAGTTTAATCATGATGCTACTCCTTCTGGAGATGCCAATATCCATTCAGTCACTGATGTCCAGCATTCACCTTCTACTTCACAACAAGTACAGGATGCTGCATATAGCCTTCAAATTATGAGGGAGGAATGGGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCTCGAAGAGCACTACGAGCACTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTTCGATGCATGCAAGCTTTGGTGAGAGTCCAGGCACGTGTTCGAGCAAGGCGTGTTCGCATAGCATTGGAAAGTCAATCAGCGCAACAGAAACTTCAGCAACAACTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAAAGACAGGAGGCTGCAGCTAAACGTGAGAGAGCAATGGCATATGCTCTGGCTCATCAGTGGCAGGCAGCATCAAGGCAGCAGGCTGCTTCTGGATTTGAACCAGATAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGGTTTCTTGACATTAATACAAGGGATGGAGTAATGGTCTGTGAAAATGGAGCAGTGGAGGGTAAAAATGGAATTAGATCTCAATTAAGATCTGCTAGCAAGAAATCAGTTCCGCCAAATGTCAATCTAAACCTTGCTAGTCAGAAAACTGGGCCATCATCATCTGATGGTGGTGACTCTTCACCTAGTAAGTCTGCTGGTTTGCCGGAGGCATCAAAAACACAGATTAAGCCAAAATCTAATGCAAACTTTGAAATTGAAGAGGCCAACTCAAGACTTAGACTTGGTTCAAGATCTCACAGTAATCCAAAGGAGAGAATCACACAAGCTGATAAACAGGCAAAAAAACGATTATCTCTGCCTAACAATGGGGGAAGCGCTGGGGCGCAAACAGCCAGAAATCCCACCAGAACTAATGTGAAGGGGGCGATCAGCACTCAAAAACCTCTTCGGGACAAACCTAAGCTCAATGGAAGAGGGGATGTGAATTCGACAAAAGCTGTTCCTCAACCCGCAGAAACGTAA 1296 0.4491 MGVSGKWIKALVGLKKSEKAESSDKDVNRIGKIRHRRKQSIDGDNEKLQNEFNHDATPSGDANIHSVTDVQHSPSTSQQVQDAAYSLQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSAQQKLQQQLANEARVREIEEGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQAASGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVCENGAVEGKNGIRSQLRSASKKSVPPNVNLNLASQKTGPSSSDGGDSSPSKSAGLPEASKTQIKPKSNANFEIEEANSRLRLGSRSHSNPKERITQADKQAKKRLSLPNNGGSAGAQTARNPTRTNVKGAISTQKPLRDKPKLNGRGDVNSTKAVPQPAET 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0679 431 MobiDBLite consensus disorder prediction 282 431 - -
Prci6g0679 431 MobiDBLite consensus disorder prediction 283 344 - -
Prci6g0679 431 SMART iq_5 91 113 IPR000048 GO:0005515
Prci6g0679 431 SMART iq_5 114 135 IPR000048 GO:0005515
Prci6g0679 431 MobiDBLite consensus disorder prediction 348 370 - -
Prci6g0679 431 FunFam IQ-domain 11 91 142 - -
Prci6g0679 431 PANTHER IQ-DOMAIN 5-RELATED 1 383 - -
Prci6g0679 431 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Prci6g0679 431 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Prci6g0679 431 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Prci6g0679 431 Gene3D - 93 134 - -
Prci6g0679 431 MobiDBLite consensus disorder prediction 372 402 - -
Prci6g0679 431 MobiDBLite consensus disorder prediction 17 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0679 Prci-Chr6 4524103 4536919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0679 1 416 IQD Protein Family AT3G22190 57.920 2.26e-128 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0679 - - qsa:O6P43_000537 552.362