Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0668 ATGGCTTCCACGTACTTTCATGGCGGGAATTCTGAGATCCAACCTTCTGGGGATGGTTTGCAGACGCTTTACCTTATGAATCCAACCTACATACCTTACTCCGACAGTACCTCTCACCACCCCGCGGCCCCTAACATGCTTCTCTTCAATCCCAACGCTGCCCCTTCTGGCAACTCCCTCAACCTCTCCCACGCGCCGCCTCCTTCCCGTAGCCACCACCTGCTCGGCGTTATCCCTACCAACATGGTCGGATCCGAAAACTCTGACATCTCTGCCTTCCATGGCTTCGCCACCGCAGCCGCCAGCACTGCTGCGCCTCGGGTTCATAACTTGTGGGGTTCTATAATTGATCATCAAACACCGTCGTCGCCTGTGGCAGTGTCGGCAACCGCACCCAGTAGTTCAGGCACGGCGGCTACTGCCAGTTTCCGAAGGCCTAGTCAGCAAGGCCTGTCACTGAGCCTTTCGTCGCAGCAGACAGCTTATAATAGGTCGCTTTCTGGTGAGCTCGATGTTCCGGGACAATCCCGAGTTTCTGCTATATCGCCGACTAGCCACATCGGCGGTGGTAGTGATATGCAGATTCTGGGGAACTCTCCGTCGTCGTCAACGGTGTCGAACGGAATTTCGAGTATGCAGAGCGTGATTTTGGGGTCAAAGTACCTGAAGGCAGCGCAAGAGCTTCTGGATGAAGTTGTGAATGTGGGAAAGGGGATTGAGAAAAGGGCGTCCATAGAGATCGAAAGGAGCAGTGATAAAGAGAAGACGAGAGCGAATAGGTCAGAATCGGAATCCGGGAATATCGGTGATGGTTCAAGTGGCGGCAAGCAAGCATGTGAACTCAGCACCGCCCAGCGGCAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTTTCCATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACAGGCACCAAATGCAGATAGTGATATCTTGGTTTGAGCAGGCAGCGGGATACGGTGCAGCCAAGTCATACACAGCACTTGCACTCGAGACAATTTCGAAGCAATTTCGATGCCTTAAGGATGCAGTGTCTTCCCAGATCAAAGCCACGAGCAAGAGCCTCGGCGAGGACGATTACTTAGGAGCCAAGGTACAGGGTTCCCGGCTCCGCTACGTGGACCACCATCTCCGGCAGCAGCGAGCTCTGCAGCAGCTCGGAATGATACAGCACAGCGCTTGGAGGCCTCAGAGAGGCTTGCCTGAACGAGCTGTCTCCATTCTTCGTGCTTGGCTTTTTGAGCATTTCCTTCACCCTTATCCCAAGGACTCCGATAAAGTTATGCTTGCAAAACAAACTGGACTTACTCGCAGCCAGGTATCGAACTGGTTTATAAATGCTCGAGTTCGGCTCTGGAAACCAATGGTAGAAGAAATGTACTTGGAAGAAACCAAGGAGCAGAACAATGAGTCCAGCCCCAAGGACAACACGAATAGATCATCAAAAGAATCAAGCAAGGATGGAAATAATGATGCAGCACACGAAGAACCAGGTTCCATTAATATTATATCATCATTTGGTCAGATTAAAGCTCTCCAGTCAAAACCAGATCATCAAACGTTCAGCAACCAAACCGCCAGTTCCCTACACGACATCTCAAATCCAACAATGGGAGTTAGCGACGTTTCGGTGGACGTGGAAATGAAGCCCCGGTTTATTAAAGATGGGTATAACCCGTTATTAAGTGACGAGGGTTATGGAGGATTCTCCATGCAAGACATTGGAAGGTTTAACGTTAGTAACGTTTCTGAACAGCATTTAGCTCCGAGGTTTCATGGGAACGGTGTTTCCCTCACTCTGGGCCTCCCTCACAGTGACAGCCTTCCTCTCTCTGCCACTCAACATGGGTTTCTCTCCCACAATATACATTTGGGAACCAATAATGCGACTGAGCTTTGTGCCATTAACGCTGCTGCTGCTGCTGCTGCTCCTCCTCCTCCTTCGCATTCCGGCGCCACCACTTATGAGAATATTGATATTCATCAGAACAGAAAGAGCTTTGCAGCCCAGTTGTTGCCGGATTTCGTCACCTGA 2058 0.5087 MASTYFHGGNSEIQPSGDGLQTLYLMNPTYIPYSDSTSHHPAAPNMLLFNPNAAPSGNSLNLSHAPPPSRSHHLLGVIPTNMVGSENSDISAFHGFATAAASTAAPRVHNLWGSIIDHQTPSSPVAVSATAPSSSGTAATASFRRPSQQGLSLSLSSQQTAYNRSLSGELDVPGQSRVSAISPTSHIGGGSDMQILGNSPSSSTVSNGISSMQSVILGSKYLKAAQELLDEVVNVGKGIEKRASIEIERSSDKEKTRANRSESESGNIGDGSSGGKQACELSTAQRQELQMKKSKLVSMLDEVEQRYRQYRHQMQIVISWFEQAAGYGAAKSYTALALETISKQFRCLKDAVSSQIKATSKSLGEDDYLGAKVQGSRLRYVDHHLRQQRALQQLGMIQHSAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKEQNNESSPKDNTNRSSKESSKDGNNDAAHEEPGSINIISSFGQIKALQSKPDHQTFSNQTASSLHDISNPTMGVSDVSVDVEMKPRFIKDGYNPLLSDEGYGGFSMQDIGRFNVSNVSEQHLAPRFHGNGVSLTLGLPHSDSLPLSATQHGFLSHNIHLGTNNATELCAINAAAAAAAPPPPSHSGATTYENIDIHQNRKSFAAQLLPDFVT 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0668 685 MobiDBLite consensus disorder prediction 521 543 - -
Prci6g0668 685 MobiDBLite consensus disorder prediction 184 204 - -
Prci6g0668 685 Gene3D - 405 484 - -
Prci6g0668 685 Coils Coil 286 313 - -
Prci6g0668 685 SMART HOX_1 402 466 IPR001356 GO:0003677
Prci6g0668 685 MobiDBLite consensus disorder prediction 262 279 - -
Prci6g0668 685 Pfam Associated with HOX 215 353 IPR006563 -
Prci6g0668 685 CDD homeodomain 402 463 IPR001356 GO:0003677
Prci6g0668 685 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 133 489 - -
Prci6g0668 685 SMART prehox3 210 354 IPR006563 -
Prci6g0668 685 FunFam BEL1-like homeodomain protein 9 405 467 - -
Prci6g0668 685 Pfam Homeobox KN domain 419 458 IPR008422 GO:0003677|GO:0006355
Prci6g0668 685 MobiDBLite consensus disorder prediction 471 501 - -
Prci6g0668 685 MobiDBLite consensus disorder prediction 471 505 - -
Prci6g0668 685 ProSiteProfiles 'Homeobox' domain profile. 399 462 IPR001356 GO:0003677
Prci6g0668 685 SUPERFAMILY Homeodomain-like 403 468 IPR009057 -
Prci6g0668 685 MobiDBLite consensus disorder prediction 249 279 - -
Prci6g0668 685 MobiDBLite consensus disorder prediction 122 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0668 Prci-Chr6 4422948 4427528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0668 3 684 Homeobox Transcription Factor Family AT2G35940 41.944 3.03e-136 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Prci6g0668 POX 1.1e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0668 - - pcin:129313430 1289.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2306 7 36314077 36317948 Prci6g0668 6 4422948 4427528 CCT