Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0666 ATGGGTTTATTGTTGAAAGAAGCCTTGAAGACTCTCTGCGGTCGGAGTCAATGGTCGTATGCTGTGTTCTGGAAGATCGGCTGCCACAATCCTAAGCTATTAATATGGGAAGAATGCTATTACGAACCCTTGCCTTGCCCCTTTCCTCCAAACGTTGATAGAATTGGGACATCTGACTTGTCCTTTGGAGGTGTGGAGGGCGACAGAGTTTGTTCCTTGATTAACAGAATGATGGTGAATAATTCAGTCAATATTGCGGGAGAGGGGATAATTGGACGGGCAGCATTCACAGGAAACCATCAATGGATTCTTTTAAGCAATTTTATTAGAGCTGCATGCCCACCAGAGGTAAAAAATGAAGTGCATCATCAATTTTCACTTGGGATGCAGACCATAGTGGTTATTCCTGTACTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTCACAATAATGGAGGATGTTGGATTTGTGAATGATGTAAGGAGTTTAATCTTGCAATTGGGATGTGTTCCTGGTGTTCTTCTATCTGAAGATTATTCAAAAAAAGCTTCTGTTCAAGGGCTCAGTGCAACTGTTACTGTTGGGGTGCCTGTCTCAAATTGCAGCCCCTCAGTGGCTAGTGGCTCCAACCAACAAAACAATTCACCCCACACTTCTAATTCCATTTTTCACCAATCTCTACTACACAGGGAAGAGATGAATAATGACCAAGTTTCTGTATTGACACATCAAACCCCTAGCCTGTCTCAGATGTTGTCCAAGTACCATGATAACCTCTGCCAAACTAAGGCAATTCCAATGACAAAACCAAACTTTACTGGGCCATCAAATGATAGAGTTGTGGAGGCACAAGTGATACCCTCAAATCTTAATTCATGTCCTCAACAAACTTCTGTTTTGTGTGATTCAAGATCTGCATTCAGTGAATTGAATGGTGTTGGCCAATCAAGTCTGAGTGACTGCAGCATGAAGTTTAATGATCAACAAACTTTATCAGGTAGTGGGAGTCAGAATTACATCAATTCTCTTATAAATGCTTCAAGTAATTCAAGCATGACTCAACTGAAGACAAACAGAGTCCATATGGCCGACCTTAATCAAAATTCTGATAGTACTCCATTACTTGGAGGAATCCCAATTCATGGTGGAATGCACAGTCTGTTGAGGTCAAGCTTGACTAATACCTCTGTTTCAGTACCTCCGAAAGTTGGTGCTGCTGATCTTTCCGGAACACGTAAAGTTGGGACTGAACTTCTAAATGATGATTCAACTAAAGCAGGGGCTTTTTCTCTCCCTTATGTGGCAAATCAATTCGGCGCTTGTCACAGACCTTTAGAAAGCTCTGATCAGAAGAATCTTCCCCTTGATTTAAAGTGTGCTCATGACAAGTTGGGTCCAACTGATCAAATGATAGATGGTGATTTGCTTCAGGCCCTTAACATCCCATCTCTTCATCTTGAGGAGCATGTGCCTGTGAGTGATCATATTATGGGTTTTGGAAATGGTTCCCTCAATAATGATGGTACAGGTCAATCTTTCACAGAACAAGAAACTTATGCCCAGCCTTCATCAGGAGATGACCTGTTTGATGTTTTAGGTGTGGATTTTAAAAACAAAATACTGCATGAAAACTGGAATAAGTTGCCTCCTGATGAATCAGATGTTAATGCCAGAGGCCTGGATAGAAAGGCAGTGTGTATGGATATGCAGGGCTTAGACACTGATTCCTATTCAGTGAATGGGACAGTATCAGATAGTGGCGTATTCTCTGGGAGGGGTTCTGATCACCTTTTGGATGCTGTGGTCTCAAGAGCTCAATCTGCGGTGAAACAGGATTCTGGTGATATGTCTTGCAGGACAACAGTGACTAAGATCAGCAGTGCCTCTGTTCCCTCTTCTTCCCACAGGAAGGTTTTGTCAGATCATGCCCTTGGTGGATTGTTGAACTTTCCGAAGACTGAGGGTAAATTAAGTGCTGCAGAAGCTTGTTCTCTTCAGTCTGAATGTCACAAGGATGATGCTGGAAACTGCTCTCAAACTTCTTCCATTTATGGGTCTCAACTCAGCTCATGGGCTGAGAATGTTAGCAATGTGAAACGTGAAAACAGTGTTTCAACTGGTTACTCTAAGCGACCAGATGAAGTTGGCAAATCAAATCGCAAAAGGCTTAAACCTGGAGAGAACCCAAGACCTCGACCTAAAGATCGCCAAATGATTCAAGACCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGCGCAAAGTGTAGCATTGATGCGCTTCTTGAACGGACCATAAAACACATGCTTTTCTTGCAAAGCGTAACAAAGCATGCTGATAAGCTGAAACAAACAGGGGACTCCAAGATTATTAATAAGGAAGGTGGGCTGCTTCTAAAAGATAATTTTGAAGGAGGGGCCACATGGGCATATGAGGTTGGCTCGCAATCAATGGTTTGCCCTATCATAGTTGAGGATCTTAATCCACCTCGTCAGATGTTAGTGGAGATGCTTTGTGAAGAACGGGGTTTCTTTCTGGAGATAGCTGACTTGATCAGGGGAATGGGTTTGACCATTTTAAAGGGGGTAATGGAAGCTCAAAATGACAAGATTTGGGCACGCTTTGCTGTGGAGGAGCTTCGCATGCTGTATTGA 2658 0.4281 MGLLLKEALKTLCGRSQWSYAVFWKIGCHNPKLLIWEECYYEPLPCPFPPNVDRIGTSDLSFGGVEGDRVCSLINRMMVNNSVNIAGEGIIGRAAFTGNHQWILLSNFIRAACPPEVKNEVHHQFSLGMQTIVVIPVLPHGVVQLGSFFTIMEDVGFVNDVRSLILQLGCVPGVLLSEDYSKKASVQGLSATVTVGVPVSNCSPSVASGSNQQNNSPHTSNSIFHQSLLHREEMNNDQVSVLTHQTPSLSQMLSKYHDNLCQTKAIPMTKPNFTGPSNDRVVEAQVIPSNLNSCPQQTSVLCDSRSAFSELNGVGQSSLSDCSMKFNDQQTLSGSGSQNYINSLINASSNSSMTQLKTNRVHMADLNQNSDSTPLLGGIPIHGGMHSLLRSSLTNTSVSVPPKVGAADLSGTRKVGTELLNDDSTKAGAFSLPYVANQFGACHRPLESSDQKNLPLDLKCAHDKLGPTDQMIDGDLLQALNIPSLHLEEHVPVSDHIMGFGNGSLNNDGTGQSFTEQETYAQPSSGDDLFDVLGVDFKNKILHENWNKLPPDESDVNARGLDRKAVCMDMQGLDTDSYSVNGTVSDSGVFSGRGSDHLLDAVVSRAQSAVKQDSGDMSCRTTVTKISSASVPSSSHRKVLSDHALGGLLNFPKTEGKLSAAEACSLQSECHKDDAGNCSQTSSIYGSQLSSWAENVSNVKRENSVSTGYSKRPDEVGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGMGLTILKGVMEAQNDKIWARFAVEELRMLY 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0666 885 MobiDBLite consensus disorder prediction 700 738 - -
Prci6g0666 885 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 879 IPR043561 GO:0003700|GO:0006355
Prci6g0666 885 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 164 IPR025610 -
Prci6g0666 885 CDD bHLH_AtLHW_like 728 797 - -
Prci6g0666 885 MobiDBLite consensus disorder prediction 714 738 - -
Prci6g0666 885 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 724 773 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0666 Prci-Chr6 4377764 4384400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0666 527 882 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.762 4.74e-105 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0666 - - aprc:113857443 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2308 7 36351437 36358028 Prci6g0666 6 4377764 4384400 CCT