Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0663 ATGGAAGTTATCCGTACGAATTTCTGCATTTTTCTCATTTTTTGCCTGATTGTAGTGGTTTACGGTTCCACAGACCCGAATGATCTCAAAATTCTGAATGATTTCAAAAAAGGTTTGGAGAATCCAGAGCTTCTTAAATGGCCAGACAATGGGGATGATCCTTGTGGTCCTCCTTCATGGCCTTACGTGTTCTGTGCTGGTAATAGAGTCACACAGATTCAGGCCAAGTCTCTGGGTCTTAAAGGATCATTACCTCCATCCTTTAACCTGCTTTCAGAGCTCTACAACTTGGGTCTTCAACACAACAAGCTTAGTGGGATGTTGCCTACTTTTAGTGGATTATCCAAGTTGGAATTTGCTTTCTTAAATGACAATCAATTTGATGGAATCCCGTCTGATTTCTTTGATGGTCTTATTAGTATTCGCGATTTATCTTTGGGAGAAAATCCATTGAATGCGAGTACTGGGTGGTCTCTTCCTGCGAGTTTAGAAACCTCAGTACAATTGACGAATCTTTCTCTTGTGCATTGTAATTTGATTGGACCAGTACCGGATTTTCTGGGCACATTGCCGTCTCTCACTAATTTGTTACTCTCATACAACCGATTGTCTGGTGGCATTCCAAGCAGCTTCGGTCAGTCTTCTATGCAGGTTTTGTGGTTGAATAACCAAGATGGTAGCGGGATGACTGGTTCAATTGATGTTATTGCTTCAATGACCTCTCTAACGCAACTTTGGCTTCATGGAAACCAATTCACTGGGACGATTCCACAGAATATCGGAAATCTAACTTCCTTGATGGATCTCAACCTCAACAGTAATCAACTTGTTGGCTTGATTCCCGAAAGTCTGGCTGATATGGAACTTAAGAATTTGGTGTTAAACAATAACAGGCTCATGGGTCCTATACCAAAGTTTAAGGCTAGTAATATTTCTTATGATTTCAATTTCTTTTGTCAACAGAAGCCTGGCCTTGAATGTGCCCCCGATGTTACTGCTCTACTTGATTTTCTCAGCAATCTGAATTACCCTTCAATGCTCACTTCTCAATGGTCTGGTAATGAACCATGTACTGGGCCATGGCTGGGATTGAGCTGCAATCCCAAGTCAGAGGTATCGATTATTAACTTCCCCCACCACAGGCTCAATGGTACTCTGAGCCCCTCACTTGCTAAGGTAGCTTCACTCCTTGAGATCAGGCTTGGAGGGAATAATTTAACTGGCCAAATTCCTAGCAGTTTAACTGAATTGAAATCTCTGAAGCTGTTGGATTTAAGTGATAATAACCTTGAGCCCCCATTGCCAAATTTTCATGGGGTGAAGCTTGTTCTTGATGGCAATCCTCTTCTTGTGAACCAAACAGGAAGAAGTCCCCAGCCTATTAGCAGCCCGCCGCCTTCAAGTTCACAATCTTCACCTCGTAACCCATCTCCTCCATCCTCTGAACGCCCACCTTCCTCAAGTCACAGTTCAAGCTCAAATCCATCAAGGTCAGAACAAGTACAATCACAAGAAGACAAATCTAGAAGATTCAGAACGCTAGCAATTGTGGCTGGAGCTGCAATTTTTGCTGTTGCAGCTATTTTGGTTATTTTCCTATTCATATATTGCTCAAAGAAGAAGAAGAAGAAGAATACCTTATTGGATGATTCCAGTTCCATTGTGGTTCACCCTCGAGACCCATCCAATCCAGATGTGGTTAAAATTGCAGTAGCAAATAACACTGCCGAAAACTTATCATTGAAAACTGGAGCAAGTTCTTTGAGAAACATTAGTGGTGAATCTGAAAGCTCTCATGTGATCGATGCTGGTAATCTTGTCATCTCTGTTCAAGTCTTACGTAAGGTTACCAAGAATTTTTCTCCCGAAAATGAACTAGGGCATGGTGGGTTTGGAACTGTCTATAAAGGTGAACTAGAAGATGGGACAAAAATAGCAGTGAAGAGAATGGAGAGTGGAGCTATGAGCAGTAAAGCACTGAATGAGTTTCAGGCTGAAATAGCTGTTCTTTCTAAGGTTCGTCACCGACATTTAGTATCTCTATTAGGATACTCCATTCAAGGCAATGAAAGACTTTTGGTCTACGAATACATGCCTCTGGGTGCTCTAAGCAAGCATCTTTTTCACTGGAAAAGCCTGAAATTGGAGCCTTTGACTTGGTCTCAGAGGCTTGTGGTAGCACTGGATGTTGCTAGAGGAATGGAATACCTCCACAGTCTTGCCCGCCAGACCTTCATCCACAGAGACCTCAAGCCGTCTAATATTCTTCTTGATGAAGGTTTTCGGGCAAAAGTTTCAGATTTTGGTCTGGTGAAACTTGCCCCAGATGGTGAGAAGTCTGTGGTGACTACGCTAGCTGGGACATTTGGATACCTTGCTCCTGAATATGCAGTGATGGGGAAAATCACCACAAAGGTTGATGTGTTCAGCTACGGTGTGGTGTTGATGGAACTTCTGACTGGACTGATGGCTCTCGACGAGAGCCGGCCAGAGGAGAGCCGATACCTAGCTCAGTGGTTTTGGCAGATTAAATCAAGCAAAGAAAAGCTCATGGCTGCCATTGATCCTGCTCTTCAAGCAACTGAAGAGACTTTTGAGAGCATCTCCATTATAGCTGAACTTGCTGGACATTGCACTGCAAGGGAACCGAACCACCGACCGGATATGAGCCATGCAGTCAATGTGCTGGCAGCATTGGTCGAAAAATGGGTGCCAATCGATGATGAGTCAGATTGTTTTACTGGCATTGACTTTGGACGACCACTTTCCCAGATGTTGAAGGATTGGAAGGAAGCAGGAAGCAAAGATGTTAGCTATGCCAGCCTTGAAGACAGCAAAGGCAGCATACCTGCAAAGCCTGTTGGGTTTGCTGACTCCTTTTCTTCTGCTGATGCTCGATGA 2901 0.4354 MEVIRTNFCIFLIFCLIVVVYGSTDPNDLKILNDFKKGLENPELLKWPDNGDDPCGPPSWPYVFCAGNRVTQIQAKSLGLKGSLPPSFNLLSELYNLGLQHNKLSGMLPTFSGLSKLEFAFLNDNQFDGIPSDFFDGLISIRDLSLGENPLNASTGWSLPASLETSVQLTNLSLVHCNLIGPVPDFLGTLPSLTNLLLSYNRLSGGIPSSFGQSSMQVLWLNNQDGSGMTGSIDVIASMTSLTQLWLHGNQFTGTIPQNIGNLTSLMDLNLNSNQLVGLIPESLADMELKNLVLNNNRLMGPIPKFKASNISYDFNFFCQQKPGLECAPDVTALLDFLSNLNYPSMLTSQWSGNEPCTGPWLGLSCNPKSEVSIINFPHHRLNGTLSPSLAKVASLLEIRLGGNNLTGQIPSSLTELKSLKLLDLSDNNLEPPLPNFHGVKLVLDGNPLLVNQTGRSPQPISSPPPSSSQSSPRNPSPPSSERPPSSSHSSSSNPSRSEQVQSQEDKSRRFRTLAIVAGAAIFAVAAILVIFLFIYCSKKKKKKNTLLDDSSSIVVHPRDPSNPDVVKIAVANNTAENLSLKTGASSLRNISGESESSHVIDAGNLVISVQVLRKVTKNFSPENELGHGGFGTVYKGELEDGTKIAVKRMESGAMSSKALNEFQAEIAVLSKVRHRHLVSLLGYSIQGNERLLVYEYMPLGALSKHLFHWKSLKLEPLTWSQRLVVALDVARGMEYLHSLARQTFIHRDLKPSNILLDEGFRAKVSDFGLVKLAPDGEKSVVTTLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEESRYLAQWFWQIKSSKEKLMAAIDPALQATEETFESISIIAELAGHCTAREPNHRPDMSHAVNVLAALVEKWVPIDDESDCFTGIDFGRPLSQMLKDWKEAGSKDVSYASLEDSKGSIPAKPVGFADSFSSADAR 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0663 966 MobiDBLite consensus disorder prediction 484 501 - -
Prci6g0663 966 Gene3D Phosphorylase Kinase; domain 1 582 697 - -
Prci6g0663 966 SMART serkin_6 620 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0663 966 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Prci6g0663 966 FunFam Receptor-like kinase TMK4 26 324 - -
Prci6g0663 966 Gene3D Transferase(Phosphotransferase) domain 1 698 911 - -
Prci6g0663 966 FunFam Leucine-rich repeat receptor-like kinase 329 453 - -
Prci6g0663 966 Pfam Protein tyrosine and serine/threonine kinase 623 895 IPR001245 GO:0004672|GO:0006468
Prci6g0663 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672|GO:0006468
Prci6g0663 966 ProSiteProfiles Protein kinase domain profile. 620 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0663 966 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Prci6g0663 966 Pfam Leucine rich repeat N-terminal domain 329 367 IPR013210 -
Prci6g0663 966 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Prci6g0663 966 MobiDBLite consensus disorder prediction 459 483 - -
Prci6g0663 966 SUPERFAMILY L domain-like 24 306 - -
Prci6g0663 966 SUPERFAMILY L domain-like 328 439 - -
Prci6g0663 966 FunFam receptor protein kinase TMK1 582 697 - -
Prci6g0663 966 CDD STKc_IRAK 626 896 - -
Prci6g0663 966 Gene3D Ribonuclease Inhibitor 26 324 IPR032675 -
Prci6g0663 966 MobiDBLite consensus disorder prediction 943 966 - -
Prci6g0663 966 MobiDBLite consensus disorder prediction 449 507 - -
Prci6g0663 966 PANTHER OSJNBA0070M12.3 PROTEIN 9 966 - -
Prci6g0663 966 FunFam receptor protein kinase TMK1 698 915 - -
Prci6g0663 966 SMART LRR_typ_2 91 113 IPR003591 -
Prci6g0663 966 SMART LRR_typ_2 190 214 IPR003591 -
Prci6g0663 966 SMART LRR_typ_2 114 137 IPR003591 -
Prci6g0663 966 SMART LRR_typ_2 263 286 IPR003591 -
Prci6g0663 966 SMART LRR_typ_2 417 439 IPR003591 -
Prci6g0663 966 SMART LRR_typ_2 239 262 IPR003591 -
Prci6g0663 966 SUPERFAMILY Protein kinase-like (PK-like) 600 896 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0663 Prci-Chr6 4338383 4342516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0663 97 911 Receptor kinase-like Gene Family AT1G55610 31.192 8.72e-81 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Prci6g0663 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0663 K00924 - tcc:18590223 1311.59