Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0657 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGTGCTTTTGGAGCTGCTATTTTAGTCCATCACAAGGCTGAGAAAAAGAAATATGTGTTGAAGAAAATCAGGCTTGCGCGACAGACTGAACGATGCAGGAGATCTGCGCATCAAGAGATGGCTCTTATTGCCCGAATCCAGCACCCTTACATCGTGGAATTTAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGGATACTGTGAAGGCGGAGACATGGCTGAATTGATGAAAAAATCAAATGGGGTTCACTTTCCTGAGGAGAAACTCTGTAAGTGGTTTACCCAGTTACTGTTGGCAGTGGAATACTTGCACGCTAACTTTGTTTTGCATCGTGACTTGAAGTGTTCCAACATCTTTCTTACCAAGGATCATGATATTCGCCTAGGGGATTTTGGGCTTGCTAAAACCTTGAAAGCAGATGATCTGGCTTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAATTGCTTGCAGACATTCCTTACGGATTTAAATCTGATATTTGGTCGCTAGGATGCTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTCGATATGGCGGGATTAATAAGCAAGATAAATCGTTCCTCCATTGGCCCTTTGCCTCCCTGTTATTCCCCGTCTCTGAAAACGCTGATAAAGGGCATGCTAAGAAAAAATCCTGAGCACCGATCGACTGCATCTGAGATCTTAAAGCATCCTTATTTGCAATCTTATGTTGAACAGTATCGACCATCTTTTAGTCCTCCAACATCCTGTTCTCCTGAAAAGCCTTTTCCTGTTACCCATGATCCTCGAAGAAATATGGCCGAAAGTCAAAACAGTAGCAGTTCTAGCAGCGACAAAGATAGTTCAATGTCAAATGACAAAATCATTTCAACAATGGTGCTGAAATGCAATGTCAAAACCACAGAGACAGATGTTGCCTACATTGATGATGAGGATGGCTCTGAGCATATCCTGCCTAGTGAAGAAGATAATAGCTCCAGCGCCAGCAATGCCAAAGCAGATTGCCAGGAGGTGATGAAACCATCATCTAATGAACGTCAATCAATTGTTGAACCTAAGCAGCCAAGAACAATTAAAAACATAATGATGGCACTAAAAGAAGGAAAGGCTAGAGAAAATGGTTCTCCAATGAGAGGTAACCGTATTAAGACTGTAAGTGCATCAACACAGAAAACAAACACAGATACGTTGCCTAAATTGCCGAAGCCTAGTGCTGTTGCTTTTGGTATCAAGCCAAATTTAGAGTCTCCAACTTTGACATCTGCAAAGACACCCCCTGATCCTCCAAAACGAATGCCAAGGTCAAATCCTTTAAAGAATCAGGCACTACTAATGATGGACTCTTCACCAAAAACTAAACCCAGACATGATGCGACTTCCCCATCTGGTCCTATTAAACAAGTTGAAGGAGATGGAGTTTCTGCCAAGGTGAGGCAAGGGATCCCCCCTAGTTTACTTAGACAACCTTCATTTCGAGGAGGAATAAGGCAGGTCGGGCTTGATGTACGCAATGTAGCAAATGATACAGAGAAGTTTGGTCCGAAAAATATGTCTCAGGAGCCAGACAAGAGTCATTATAAGGTGCCCAATGGTGATATGCCACGTCCTTCTAGAGAGGTTATAGAGCCTCGGAGGGATTCTGAAAAATGTTCCAAAGGAATGCAGACAGATAGCAGCAATTCCGTTTCATCTTCAGTGTCTATTCAAGGATGTGAACTTTCTGATGATGCAACAAATTTTATTGACATGACAGAACAGAAGCCTTCTGATCATGGGAACGCAACACATATTGACACTATAAAGTCACATCCAGACAAGAGTCATTATCACTCACCCAATGATCATATACCACGGGCTTCTGGGGAGATTACTGAGCCTAAGAAGGCTTCTGAAAAATGTTCCATAGGAATGCAGACAGATAGCAGTAATTCTGTTTTGTCTTCAGTTTCTATTCGAGGATTTGAACATTCTGACGATGCAACAAATTTTATTGACATGAGAGAACAGATGCCTTCTGATCATGGGAGTGCAACACATATTGAAGCTATAAAATCATATCCAGACAGCAGCCCACCTGCTACCTATTTGTATCGTCAGATGGCTGAAACTATATCTAGGGAAGCCTCTGAACCCGCCTGGAATCTTCAGAATACAATTACTAATAATGAGAAAGGAAGTCCCGATTTAACTCTTGATCACTCTGCTCAATATTTCAAGGAAATATTGGCCTCTGAAGATAGTTTCCACATCGATCAGACAAGTATATCTGCTGCCACCTCATGTAATAATAGATCCACAAATCCCTCTGTTGTAGCCAGCGAAGGAATTAAAGATCTTCAAGATAATACTGAGCAAGTGACTTCAACCAGCTCTCCGAAACTTCCACTCTTGAGTGCTGGAGAAAAGTTTGTTAGTGAAGAAGTCGCTCCAGTAAGCAAGCCCAATAATGCACCCGAAACATCGATCCAGCCAAAACCCGTGCTTGAGTCCACTGGTGATGACAAGTTCACTGTGAGGGAAAGATTGTCATCTGTGGCTGAAACTGCTTCACCAATAACCTCTACCAATGGCCAAAAAGGCTCGCTCGAAGATAAAGGAACCGTTTTGCATAATCCAGTGATAGAAAGGCCAGCTGTTGGTAACCTTCCTCCAGCTTTTGATGATGTCATCCATGTTATACGACATAGCAGTTATCGTGTTGGGAGTGAGCAGCCAGTAAAGGAATCTGTGGAGATGGGAGTTCAAAACGTGGATGTTGGTAAATTTCTCAATGTTGTAAGGGAAGATTTAGAAATGAGAAACATGGGCAATCCTCCGACCCTTAATTCTTCAAATTGTTCTGAAGCTGGGAGCTTGAAGTCAAAATTTTCTGATCACTTCGACGAAAGAAGCATGAGCACTCCTCCATCTCTAAAATCTTCAAGTTGTGTTGATGCTCTGAGCACAAAACCAAGTGCCTCTGATCATTCCGGTGTCAAGGAACAAGGCGTGAAAAATCTTGTTTCTCAAGTTTCCAAATCCAATTCCCCCGAGTTGAGTAAATGTGACTCTTCAGTGACTGAAGAGGAAACCCCAGCAAAAGAAATTTTGGATGTTAAATCATTTAGGCAGAGAGCAGATGCTCTTGAAGGGCTCTTGGAGTTGTCTGCAGACTTGCTGCAGCAAAATAGGTTGGAGGAGCTTGCTGTTGTTCTAAAGCCCTTTGGTAAAGATATGGTATCTCCAAGAGAGACAGCCATTTGGTTGGCAAAGAGCTTAAAGGGAATGATGAGCGATGACAATGGTGGACGCTGA 3381 0.4286 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVHFPEEKLCKWFTQLLLAVEYLHANFVLHRDLKCSNIFLTKDHDIRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRSTASEILKHPYLQSYVEQYRPSFSPPTSCSPEKPFPVTHDPRRNMAESQNSSSSSSDKDSSMSNDKIISTMVLKCNVKTTETDVAYIDDEDGSEHILPSEEDNSSSASNAKADCQEVMKPSSNERQSIVEPKQPRTIKNIMMALKEGKARENGSPMRGNRIKTVSASTQKTNTDTLPKLPKPSAVAFGIKPNLESPTLTSAKTPPDPPKRMPRSNPLKNQALLMMDSSPKTKPRHDATSPSGPIKQVEGDGVSAKVRQGIPPSLLRQPSFRGGIRQVGLDVRNVANDTEKFGPKNMSQEPDKSHYKVPNGDMPRPSREVIEPRRDSEKCSKGMQTDSSNSVSSSVSIQGCELSDDATNFIDMTEQKPSDHGNATHIDTIKSHPDKSHYHSPNDHIPRASGEITEPKKASEKCSIGMQTDSSNSVLSSVSIRGFEHSDDATNFIDMREQMPSDHGSATHIEAIKSYPDSSPPATYLYRQMAETISREASEPAWNLQNTITNNEKGSPDLTLDHSAQYFKEILASEDSFHIDQTSISAATSCNNRSTNPSVVASEGIKDLQDNTEQVTSTSSPKLPLLSAGEKFVSEEVAPVSKPNNAPETSIQPKPVLESTGDDKFTVRERLSSVAETASPITSTNGQKGSLEDKGTVLHNPVIERPAVGNLPPAFDDVIHVIRHSSYRVGSEQPVKESVEMGVQNVDVGKFLNVVREDLEMRNMGNPPTLNSSNCSEAGSLKSKFSDHFDERSMSTPPSLKSSSCVDALSTKPSASDHSGVKEQGVKNLVSQVSKSNSPELSKCDSSVTEEETPAKEILDVKSFRQRADALEGLLELSADLLQQNRLEELAVVLKPFGKDMVSPRETAIWLAKSLKGMMSDDNGGR 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0657 1126 MobiDBLite consensus disorder prediction 293 314 - -
Prci6g0657 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Prci6g0657 1126 SUPERFAMILY Protein kinase-like (PK-like) 4 316 IPR011009 -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 992 1018 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 438 501 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 807 824 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 872 891 - -
Prci6g0657 1126 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0657 1126 MobiDBLite consensus disorder prediction 544 558 - -
Prci6g0657 1126 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0657 1126 CDD STKc_Nek 7 262 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 988 1023 - -
Prci6g0657 1126 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 349 380 - -
Prci6g0657 1126 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Prci6g0657 1126 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Prci6g0657 1126 MobiDBLite consensus disorder prediction 538 594 - -
Prci6g0657 1126 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0657 1126 MobiDBLite consensus disorder prediction 632 653 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 272 314 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 566 581 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 344 380 - -
Prci6g0657 1126 Gene3D Transferase(Phosphotransferase) domain 1 90 334 - -
Prci6g0657 1126 MobiDBLite consensus disorder prediction 807 893 - -
Prci6g0657 1126 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Prci6g0657 1126 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 1076 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0657 Prci-Chr6 4305912 4313558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0657 14 264 MAP Kinase Kinase Kinase AT1G53570 31.641 5.64e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Prci6g0657 Pkinase 3.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0657 K08857 - gmx:100818747 1236.09