Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0650 ATGTCTTCCACCAAGAGAACTCTTCTCAGAATCCTCCTCGCTGCAAATGGAAGCTGTGGCTGCGCCAGGCCCAAGCCCACCGACGTCTTCGAGCCGGAGCCCAAGCCCAATCATCGCGGCCCAAACCCAATCGGCAGCCTGACGTCCTCTACTACCACGTCCGGCGACCCCAATGGCGCGCATTCCGTAGACGAAGATGACGGAGACTTCACCTCCACCAACGCGTCGGAAGCGGAGACGGAGACTCAGAGGAGCTGGAAGAATGCGAGCAACATGTTGCCGAAGCAGAGTCCGTTAGTGGACAGCGTGGCGGTGGAGAAGGAGTCGGAGGATCCGTACAAGGATTTCAGGCACTCGATGCTGCAGATGATATTCGAGAAGGAGATGTACTCGGAGTCTGATCTGGAGGAGCTTCTGGAAGCATTCCTGGAGCTGAACTCGCCGAGACAGCACGAGGTGATCGTGAAGGCCTTCACGGAAATCTGCCAGGACGCGTTTCCTGATAATAATAATAATAATAATAAGACGACGACGACGAGGAGGAGCAAGGGCAAGGAGATTAGTTTTTACGGTCACGTGAGGAAGCTGCCCTTGGCACGTGCGCTGGCCATGTGA 615 0.5577 MSSTKRTLLRILLAANGSCGCARPKPTDVFEPEPKPNHRGPNPIGSLTSSTTTSGDPNGAHSVDEDDGDFTSTNASEAETETQRSWKNASNMLPKQSPLVDSVAVEKESEDPYKDFRHSMLQMIFEKEMYSESDLEELLEAFLELNSPRQHEVIVKAFTEICQDAFPDNNNNNNKTTTTRRSKGKEISFYGHVRKLPLARALAM 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0650 204 Pfam Transcriptional repressor, ovate 109 164 IPR006458 -
Prci6g0650 204 NCBIfam uncharacterized plant-specific domain TIGR01568 103 162 IPR006458 -
Prci6g0650 204 MobiDBLite consensus disorder prediction 73 93 - -
Prci6g0650 204 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Prci6g0650 204 MobiDBLite consensus disorder prediction 42 59 - -
Prci6g0650 204 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Prci6g0650 204 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 53 165 IPR038933 GO:0045892
Prci6g0650 204 MobiDBLite consensus disorder prediction 20 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0650 Prci-Chr6 4270211 4271206 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci6g0650 Ovate 3.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0650 - - pcin:129314681 362.844