Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0624 ATGGAGGCTCCTTACCCTGGTTTTCGCTTCTACCCAACAGAAGAAGAGCTCGTCTCCTTCTACCTCCACAACAAGCTCGAAGGTCTCAGACCCGACATGGACAGAGTCATCCCTGTTCTTCAAATCTACAACGTCGAGCCCTGGCAACTCCCACAGCTTGCTGGAGAAGCATGTCGCCTGGATACAGAGCAATGGTTCTTCTTCTCGCCGAGGCAAGAGAGAGAAGCAAGAGGAGGGAGGCCCAACAGAACCACCACTTCGGGATACTGGAAAGCCACCGGTTCTCCGGGTTACGTTTACTCTTCCGATAACAAGGTGATCGGCGTGAAGAAAAACATGGTTTTTTACAGAGGCAAAGCTCCCACCGGCAGGAAAACCAAGTGGAAGATGCATGAATACAGAGCCATTGAACCCTCCAACTCCGCCGCCTCCATTCCCACGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTATGTGATATCGGGGAGCTTCAGAGCATTTGATCGACGGCCATTTCAAGGGGACGGAGCCTCTGGTTCTGGTGCCGCAACTAGTATTCCTGATGGCGAAGGTCGGAGAGCGAGCTCGTCGTCCGACACTTCAAACTCAGGAGCAGACCATGCAGAAGTTGCAGAACGGAATGCCAATGATGAGATTGTACGAGAGCCTCTGTGGGAATGGGAACAGCTTAATTGGCTCTGA 702 0.5242 MEAPYPGFRFYPTEEELVSFYLHNKLEGLRPDMDRVIPVLQIYNVEPWQLPQLAGEACRLDTEQWFFFSPRQEREARGGRPNRTTTSGYWKATGSPGYVYSSDNKVIGVKKNMVFYRGKAPTGRKTKWKMHEYRAIEPSNSAASIPTLRHEFSLCRVYVISGSFRAFDRRPFQGDGASGSGAATSIPDGEGRRASSSSDTSNSGADHAEVAERNANDEIVREPLWEWEQLNWL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0624 233 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 188 - -
Prci6g0624 233 MobiDBLite consensus disorder prediction 171 215 - -
Prci6g0624 233 Gene3D NAC domain 13 163 IPR036093 GO:0003677|GO:0006355
Prci6g0624 233 ProSiteProfiles NAC domain profile. 4 160 IPR003441 GO:0003677|GO:0006355
Prci6g0624 233 Pfam No apical meristem (NAM) protein 6 134 IPR003441 GO:0003677|GO:0006355
Prci6g0624 233 MobiDBLite consensus disorder prediction 190 207 - -
Prci6g0624 233 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0624 Prci-Chr6 4127941 4129191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0624 7 232 NAC Transcription Factor Family AT5G22380 61.404 2.89e-96 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci6g0624 NAM 3.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0624 - - qsu:112025473 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2348 7 36500191 36501597 Prci6g0624 6 4127941 4129191 CCT