Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0602 ATGTACCATCATCACCAACACCAAGGAAAGAACATCCATTCTTCTTCTTCCAGAATGCCAATCTCGGCTGAGAGGCACATGTTCCTTCAAACTGGAAATGGCTCTGGTGATTCTGGACTCGTCCTCTCTACTGATGCTAAGCCCAGATTGAAATGGACAGCAGATCTTCATGCCAGGTTTATAGAAGCGGTCAATCAGCTAGGTGGAGCTGACAAAGCAACTCCGAAGACAGTAATGAAACTCATGGGAATTCCAGGGCTTACTTTGTATCATCTAAAGAGCCATCTTCAGAAGTATAGATTGAGCAAGAATCTGCATGGACAAAGTAACAACGTGACACACAAAATCAGTGCAGCAACGGCAGAAAGACTTTCTGAAACAAGTGGAACACATATGAATAATTTAAGCCTCGGGCCACAAGCTAACAAAGATTTACACATAAGCGAGGCCCTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTGCAGAGACACTTGCAGCTTCGCATAGAGGCCCAAGGGAAATACCTGCAGGCTGTGCTTGAGAAAGCTCAAGAAACACTTGGTAGACAGAATTTGGGGGTAGTGGGACTTGAAGCAGCCAAAGTTCAACTCTCAGAACTTGTGTCCAAAGTATCCTCTCAGTGCTTGAGTTCTGCCTTTTCAGAACTGAAGGAACTACAAGGATTCTGCCCACAGCAAACACAAAACAACCAGCCAACCGACTGCTCAATGGACAGCTGCCTCACATCCTGCGATGGATCTCAAAAGGATCAAGAAATACAAAATGCAGGGATGGGCTTACGATCCTTCAATGGACATTCATTCATGGAAAGAAAGGGAGCCATGGAAGCACCCATCTTAAGGAACTCTGAACTCAAGTGGTGTGATGAAGTGAAAAGGAACAGCACCTTTCTGAGCAATTCTTTGGGTAAGAGTGCGGAAAGAAGAGGTTACGCTGCCGAAAGAAGTCCCAGCGACTTATCTATGAGCATCGGACTTGAACGAGAAACCGAGAATAACGGAAGCAGCATGTATCCTGAGAGACTAATGATGGGGAGAGAGTCAGGTGGTGAGTTCCAACACCGAAACGCAAGTAAACAAGAATCAATAAAACCACTGGAAGAAAAGGTACCTCAGGAGTATAGATTGCCTTACTTCGCAACATCAAGACTGGACCTCAACACCCGTGAAGAAACCGATGCTGCGGTGAGCTGCAAACAACTGGATTTGAATGGACTCAGCTGGAGCTGA 1269 0.4578 MYHHHQHQGKNIHSSSSRMPISAERHMFLQTGNGSGDSGLVLSTDAKPRLKWTADLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKISAATAERLSETSGTHMNNLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKVQLSELVSKVSSQCLSSAFSELKELQGFCPQQTQNNQPTDCSMDSCLTSCDGSQKDQEIQNAGMGLRSFNGHSFMERKGAMEAPILRNSELKWCDEVKRNSTFLSNSLGKSAERRGYAAERSPSDLSMSIGLERETENNGSSMYPERLMMGRESGGEFQHRNASKQESIKPLEEKVPQEYRLPYFATSRLDLNTREETDAAVSCKQLDLNGLSWS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0602 422 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 299 IPR044848 GO:0003700
Prci6g0602 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Prci6g0602 422 Pfam Myb-like DNA-binding domain 49 100 IPR001005 -
Prci6g0602 422 Pfam MYB-CC type transfactor, LHEQLE motif 146 192 IPR025756 -
Prci6g0602 422 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Prci6g0602 422 FunFam Myb family transcription factor 46 104 - -
Prci6g0602 422 Coils Coil 148 168 - -
Prci6g0602 422 Gene3D - 46 104 - -
Prci6g0602 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0602 Prci-Chr6 4019848 4022994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0602 79 422 G2-like Transcription Factor Family AT3G04030 51.585 1.05e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci6g0602 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0602 - - gmx:100810396 654.825