Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0597 ATGGCGAGTCACAGAATAGGACAGAGTGGTTTGTCTGAGTCATCGCCTTCAGGCCATCACTATGGACTACTTCACGGGATTAATAATACTCCTGCGGCATCCAGCTTAATCAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTGCAAGGAGTAGACATTAGAAATGATGAAGGCAGAGCACCTTTATTCATATCCAGGCCTGCAGCTACTACTCTGGAAATGTTCCCGTCTTGGCCAATCAGATTTCAGCAAACCCATAGAGTAGTGGGAGGACCAAAGTCAGGAGGAGAAAGCGCTGATTCAGGATCAGCTGTTAACACCATATCAAACAAAACTGAGCCTCAGCTTGAATTTGAACCAGAATCTCCCATTAGTAAGAAAGCATCTTCTTCTTCAGACCTTCATCGTCATCATCAGAAGCAACAGCAACTTCAACAGGAGATGGCAAGTGATGCCTCAAGAACAGGCCCATCACAGAATCAATCACCTGCCAAATCACCTCAGGAAAAGAAGGGAGCAGGTTCTTCATCCGAAAAACAACTTGATGCAAAGACACTGAGACGTCTAGCTCAAAACAGAGAGGCTGCAAGGAAGAGCCGTCTGAGGAAAAAGGCTTACGTGCAGCAGCTAGAGTCCAGTAGGATCAAGCTTACCCAGATTGAACAAGACCTTCAAAGAGCCCGCTCTCAGGGATTGTTCTTAGGCTGTGCTGGTGCAGGTGGCAACATAAGCTCCGGAGCGGCAATATTTGACATGGAATATGCAAGATGGCTAGAGGAAGACCACCGGCACGTGACGGAGTTACGGGCGGCGTTGCAGGCGGCGTTATCGGACAGTGAGCTTAGAATAATGGTGGACGGATATCTGTCTCATTACGACGAGATCTTCAGGCTCAAAGGAGCCGCTGCAAAATCAGACGTTTTTCATCTCATCACCGGCATGTGGACCTCTCCTGCTGAACGCTGCTTCCTATGGATGGGTGGTTTCAGACCCTCTGAACTCATCACGATGTTGATTCAGCAGCTAGAGCCGCTGGCTGAGCAGCAGATTATGGGAATGTACGGTCTCAGACATTCTTCACAGCAAGCAGAAGAGGCTCTCTCTCAAGGCCATGAACAGCTCCAGCAGTCCCTCGTCGACACCATTGCCGGCGGCCCCGTCGGCGACGGCGTGCAACAGATGGTCATCGCCATGAGCAAGCTCGCCAATCTTGAAGGATTCGTCCGCCAGGCTGATAACTTGAGGCAACAGACACTTCACCAGTTATGCAGATTGCTGACAATCCGTCAGGCAGCAAGATGCTTCCTCGTAATGGGAGAGTATTATGGTCGCCTTCGTGCCCTCAGTTCTCTCTGGGCTTCCAGACCTCGAGAGACGATGATGAACGAGGATAATTCGTGCCAAACAACGACGACGGAATTGCAGATGGTTCAACCTCATCATCATCATCAGAATCATTTTGGCAGTTTCTGA 1491 0.4943 MASHRIGQSGLSESSPSGHHYGLLHGINNTPAASSLINQGSAFDFGELEEAIVLQGVDIRNDEGRAPLFISRPAATTLEMFPSWPIRFQQTHRVVGGPKSGGESADSGSAVNTISNKTEPQLEFEPESPISKKASSSSDLHRHHQKQQQLQQEMASDASRTGPSQNQSPAKSPQEKKGAGSSSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQIEQDLQRARSQGLFLGCAGAGGNISSGAAIFDMEYARWLEEDHRHVTELRAALQAALSDSELRIMVDGYLSHYDEIFRLKGAAAKSDVFHLITGMWTSPAERCFLWMGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGHEQLQQSLVDTIAGGPVGDGVQQMVIAMSKLANLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVMGEYYGRLRALSSLWASRPRETMMNEDNSCQTTTTELQMVQPHHHHQNHFGSF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0597 496 CDD bZIP_HBP1b-like 190 241 - -
Prci6g0597 496 FunFam BZIP family transcription factor 189 238 - -
Prci6g0597 496 Gene3D - 189 238 - -
Prci6g0597 496 Pfam Seed dormancy control 270 345 IPR025422 GO:0006351|GO:0043565
Prci6g0597 496 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 193 208 IPR004827 GO:0003700|GO:0006355
Prci6g0597 496 SUPERFAMILY Leucine zipper domain 190 233 IPR046347 GO:0003700|GO:0006355
Prci6g0597 496 PANTHER TRANSCRIPTION FACTOR TGA9 135 464 - -
Prci6g0597 496 SMART brlzneu 186 251 IPR004827 GO:0003700|GO:0006355
Prci6g0597 496 MobiDBLite consensus disorder prediction 149 180 - -
Prci6g0597 496 MobiDBLite consensus disorder prediction 94 191 - -
Prci6g0597 496 Coils Coil 216 236 - -
Prci6g0597 496 ProSiteProfiles DOG1 domain profile. 253 461 IPR025422 GO:0006351|GO:0043565
Prci6g0597 496 MobiDBLite consensus disorder prediction 105 122 - -
Prci6g0597 496 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 232 IPR004827 GO:0003700|GO:0006355
Prci6g0597 496 Pfam bZIP transcription factor 189 228 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0597 Prci-Chr6 3982321 3989312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0597 142 496 bZIP Transcription Factor Family AT1G08320 68.156 1.38e-178 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci6g0597 DOG1 2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0597 K14431 - gmx:100775461 723.391