Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0596 ATGGCGAGTCACAGAATAGGACAGAGTGGTTTGTCTGAGTCATCGCCTTCAGGCCATCACTATGGACTACTTCACGGGATTAATAATACTCCTGCGGCATCCAGCTTAATCAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTGCAAGGAGTAGACATTAGAAATGATGAAGGCAGAGCACCTTTATTCATATCCAGGCCTGCAGCTACTACTCTGGAAATGTTCCCGTCTTGGCCAATCAGATTTCAGCAAACCCATAGAGTAGTGGGAGGACCAAAGTCAGGAGGAGAAAGCGCTGATTCAGGATCAGCTGTTAACACCATATCAAACAAAACTGAGCCTCAGCTTGAATTTGAACCAGAATCTCCCATTAGTAAGAAAGCATCTTCTTCTTCAGACCTTCATCGTCATCATCAGAAGCAACAGCAACTTCAACAGGAGATGGCAAGTGATGCCTCAAGAACAGGCCCATCACAGAATCAATCACCTGCCAAATCACCTCAGGAAAAGAAGAAGGGAGCAGGTTCTTCATCCGAAAAACAACTTGATGCAAAGACACTGAGACGTCTAGCTCAAAACAGAGAGGCTGCAAGGAAGAGCCGTCTGAGGAAAAAGGCTTACGTGCAGCAGCTAGAGTCCAGTAGGATCAAGCTTACCCAGATTGAACAAGACCTTCAAAGAGCCCGCTCTCAGGGATTGTTCTTAGGCTGTGCTGGTGCAGGTGGCAACATAAGCTCCGGAGCGGCAATATTTGACATGGAATATGCAAGATGGCTAGAGGAAGACCACCGGCACGTGACGGAGTTACGGGCGGCGTTGCAGGCGGCGTTATCGGACAGTGAGCTTAGAATAATGGTGGACGGATATCTGTCTCATTACGACGAGATCTTCAGGCTCAAAGGAGCCGCTGCAAAATCAGACGTTTTTCATCTCATCACCGGCATGTGGACCTCTCCTGCTGAACGCTGCTTCCTATGGATGGGTGGTTTCAGACCCTCTGAACTCATCACGATGTTGATTCAGCAGCTAGAGCCGCTGGCTGAGCAGCAGATTATGGGAATGTACGGTCTCAGACATTCTTCACAGCAAGCAGAAGAGGCTCTCTCTCAAGGCCATGAACAGCTCCAGCAGTCCCTCGTCGACACCATTGCCGGCGGCCCCGTCGGCGACGGCGTGCAACAGATGGTCATCGCCATGAGCAAGCTCGCCAATCTTGAAGGATTCGTCCGCCAGGCTGATAACTTGAGGCAACAGACACTTCACCAGTTATGCAGATTGCTGACAATCCGTCAGGCAGCAAGATGCTTCCTCGTAATGGGAGAGTATTATGGTCGCCTTCGTGCCCTCAGTTCTCTCTGGGCTTCCAGACCTCGAGAGACGATGATGAACGAGGATAATTCGTGCCAAACAACGACGACGGAATTGCAGATGGTTCAACCTCATCATCATCATCAGAATCATTTTGGCAGTTTCTGA 1494 0.494 MASHRIGQSGLSESSPSGHHYGLLHGINNTPAASSLINQGSAFDFGELEEAIVLQGVDIRNDEGRAPLFISRPAATTLEMFPSWPIRFQQTHRVVGGPKSGGESADSGSAVNTISNKTEPQLEFEPESPISKKASSSSDLHRHHQKQQQLQQEMASDASRTGPSQNQSPAKSPQEKKKGAGSSSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQIEQDLQRARSQGLFLGCAGAGGNISSGAAIFDMEYARWLEEDHRHVTELRAALQAALSDSELRIMVDGYLSHYDEIFRLKGAAAKSDVFHLITGMWTSPAERCFLWMGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGHEQLQQSLVDTIAGGPVGDGVQQMVIAMSKLANLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVMGEYYGRLRALSSLWASRPRETMMNEDNSCQTTTTELQMVQPHHHHQNHFGSF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0596 497 Pfam Seed dormancy control 271 346 IPR025422 GO:0006351|GO:0043565
Prci6g0596 497 MobiDBLite consensus disorder prediction 94 192 - -
Prci6g0596 497 MobiDBLite consensus disorder prediction 178 192 - -
Prci6g0596 497 Gene3D - 190 239 - -
Prci6g0596 497 CDD bZIP_HBP1b-like 191 242 - -
Prci6g0596 497 SUPERFAMILY Leucine zipper domain 191 234 IPR046347 GO:0003700|GO:0006355
Prci6g0596 497 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Prci6g0596 497 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 233 IPR004827 GO:0003700|GO:0006355
Prci6g0596 497 MobiDBLite consensus disorder prediction 149 173 - -
Prci6g0596 497 ProSiteProfiles DOG1 domain profile. 254 462 IPR025422 GO:0006351|GO:0043565
Prci6g0596 497 SMART brlzneu 187 252 IPR004827 GO:0003700|GO:0006355
Prci6g0596 497 Pfam bZIP transcription factor 190 229 IPR004827 GO:0003700|GO:0006355
Prci6g0596 497 FunFam BZIP family transcription factor 190 239 - -
Prci6g0596 497 MobiDBLite consensus disorder prediction 105 122 - -
Prci6g0596 497 Coils Coil 217 237 - -
Prci6g0596 497 PANTHER TRANSCRIPTION FACTOR TGA9 135 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0596 Prci-Chr6 3982321 3989322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0596 142 497 bZIP Transcription Factor Family AT1G08320 67.778 3.74e-178 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci6g0596 DOG1 2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0596 K14431 - gmx:100775461 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2392 7 36610904 36616660 Prci6g0596 6 3982321 3989322 CCT