Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0572 ATGAAGGTGATTGCTGCGTATTTGTTGGCAGTGTTGGGAGGGAACACATCTCCTTCGGCCGATGATATAAAGAACATTCTTGGCTCAGTTGGCGCTGAGGCTGATGATGAGAGAATTGAGCTTCTCTTAAACGAGGTTAATGGCAAAGATATTACTGAACTGATTGCTGCAGGAAGAGAAAAGCTTGCTTCAGTTCCAGGCGGTGGAGGTGCAGTTGCTGCCGTTGCTGCACCTACCGGTGGAGCTGCAGCTGGTGGTGCTGCACCTGCTGCTGAGGCAAAGGAGGAAAAGAAGGTGGAAGAGAAAGAGGAGTCTGATGAGGACATGGGTTTCAGCTTATTCGACTAA 348 0.4943 MKVIAAYLLAVLGGNTSPSADDIKNILGSVGAEADDERIELLLNEVNGKDITELIAAGREKLASVPGGGGAVAAVAAPTGGAAAGGAAPAAEAKEEKKVEEKEESDEDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0572 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Prci6g0572 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Prci6g0572 115 Gene3D - 1 59 IPR038716 -
Prci6g0572 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Prci6g0572 115 MobiDBLite consensus disorder prediction 91 105 - -
Prci6g0572 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Prci6g0572 115 MobiDBLite consensus disorder prediction 81 115 - -
Prci6g0572 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0572 Prci-Chr6 3772945 3774974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0572 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.087 1.13e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0572 K02943 - qsu:111996733 137.117