Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0569 ATGACAAGCCTCTTCTGTGTGTGGTTCACCTTATTAAAAATTCTAGAATTTAGGAAGCATTTGAAAGATGGGGTTCCTGTCTCACTCTCATTGAAGGCAAAGGCACAGTCCACACTTGCGGGAGAAATGAGGGCGTTGTACAATTCCGGAGGCAACCTCAGTAATTTACGATTTTGCCATTGCCCTCAATTCCCCTCCTCGAACGCACCATTTGTTATTCTTCCATCACGAATTCCATGCCTTTCTCTCAGAAACCCCACTACTGCACTTTCCTGCAACCATAATCTCTTTTCTCCTTCGGGGTCGTCGTCGATTCAACCACTGATGGCTTCTCCTACCTCATCCATTGACACTGACCAGGATACAAAGCCACTCTCGGTGCTTTTTGTTTGCCTCGGCAACATCTGTCGGAGCCCAGCCGCTGAAGGGGTCTTCAGACACTTGGTCAAGCAAAGGGCTTTAGATTCCAACTTCAAAATTGATTCTGCAGGCACCATTAATTACCATGAGGGAAATGAAGCAGACCCAAGGATGAGAGCAGCCTCAAAAAGGCGAGGTATTGAGATAACCTCTATTTCCAGGCCAATCCAGCCATCTGATTTCCGAGATTTTGATCTTATCCTTGCTATGGACAAGCGAAACAAAGAGGACATGTTAGAGGCATTCAATATATGGAAGTCTAGAGATAGTTTACCAGCTGATGCATATAAGAAGGTTAAATTGATGTGCTCGTATTGTAAAAAACATGATGAAACTGAAGTCCCTGATCCTTACTATGGCGGGCCACAAGGGTTTGAGAAGGTGTTGGATTTGCTTGAAGATGCTTGTGAATCATTGTTGGACGACATTTTGGCAGAGCATAAACATTTAAAAGAATGA 879 0.4414 MTSLFCVWFTLLKILEFRKHLKDGVPVSLSLKAKAQSTLAGEMRALYNSGGNLSNLRFCHCPQFPSSNAPFVILPSRIPCLSLRNPTTALSCNHNLFSPSGSSSIQPLMASPTSSIDTDQDTKPLSVLFVCLGNICRSPAAEGVFRHLVKQRALDSNFKIDSAGTINYHEGNEADPRMRAASKRRGIEITSISRPIQPSDFRDFDLILAMDKRNKEDMLEAFNIWKSRDSLPADAYKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDDILAEHKHLKE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0569 292 PRINTS LMW phosphotyrosine protein phosphatase signature 127 144 IPR017867 GO:0004725|GO:0006470
Prci6g0569 292 PRINTS LMW phosphotyrosine protein phosphatase signature 170 186 IPR017867 GO:0004725|GO:0006470
Prci6g0569 292 PRINTS LMW phosphotyrosine protein phosphatase signature 254 269 IPR017867 GO:0004725|GO:0006470
Prci6g0569 292 Pfam Low molecular weight phosphotyrosine protein phosphatase 127 280 IPR023485 -
Prci6g0569 292 FunFam Low molecular weight protein-tyrosine-phosphatase 124 288 - -
Prci6g0569 292 CDD LMWPTP 126 281 - -
Prci6g0569 292 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 103 288 - -
Prci6g0569 292 Gene3D - 109 288 - -
Prci6g0569 292 SMART LMWPc_2 125 282 IPR023485 -
Prci6g0569 292 SUPERFAMILY Phosphotyrosine protein phosphatases I 123 283 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0569 109 286 Protein tyrosine phosphatase (PTP) family AT3G44620 66.169 6.22e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0569 K25307 - qsa:O6P43_000441 347.821