Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0540 ATGGCTTTAGCTTGGCCCAACCATATACTTTTTCGGTCTAGCACCAACTGCGTTATCCTCTCCGATCTCACCGAATCTCGCTCTGCTGAAACGCTATGGCCGATTTCTTCGACTCTAGTACACCGGAGAAACATCTCCTTGCTGTCCACGGCTACGTTGACAGCCAAGACTTTGACGCCTTCCCTCGGATGCTTCAGCAAATCCACGGAGGATAAGCAGTGGACTGAAGCGGAAACTATCGTTTCAGATTCCGATACTGGGAGCAGAGAGGAGGAGAATGAGACTAGCAGCCAGATTTCTGTTAGTACTAATGGTCGGGTTGACTCCCAATCCCGTAGAACTGCGACCACCGCGTTTGGTGATTCTGTCTCCTTGGGAATTCGGGAACCAGTTTATGAGGTTGTAGAAGTAAAGTCAAACGGAGCACTATCAACCAAAAAAATCAACAGGAGGCAACTATTAAAAATGAGCGGTCTTCGTCCAAGAGACATTCGAAGTGTGGATCCATCATTGTTTTTGACAAATTCTATGCCTTCGCTGCTGCATATCGTTCTGCATCTTTTCATATCAATCAGTAAAGGTGGGAAAGCTTTTCTTGAGACATTGCTGCCTCGGTTGAACCCTAAGAACAGCAATGGTGGGCCATCGATGCCATTTGAGCTTGAGGTTGTTGAAGCAGCATTGCTATCAAGAACACAGCGGTTAGAGCAGAGATTGATGGACTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGTCTTGCCTAACCGATTAACTGGTGACATATTGGAGCAACTACGTATTAGTAAACAAACTTTGGTTGAATTAGGTTCCAGGGCAGGAGCTCTCAGACAAATGCTGCTTGATCTTCTGGAGGACCCTCATGAAATACGCCGCATATGTATTATGGGAAGCAATTGCACTCTTAAGAGAGGAAGTGATGTTGTGGAGTGTTCAGTGCCCTTAGAAAAACAGATTGCTGAGGAAGAAGAGGAAGAAATTGAGATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTGGATTCTGCGAGGGAAATGGAAGATTCTATAGCTGTAAATTTGAGCTCACGGAGGCTTGAGGTTAGCAGAGTGGAACTGCTTCTTCAGGTTGGGACATTCTGTGTGGCAGTCGGTGCCCTAGTTGCAGGTATATTTGGCATGAACCTGAAATCATATCTTGAAGAACATGTGTTTGCATTTTGGCTGACAACAGCTGGGATTATTGTTGGCGCGGTCATTACATTTTTCCTTATGTATTACTATCTCAAGGCAAGGAAAATACTCTGA 1332 0.4497 MALAWPNHILFRSSTNCVILSDLTESRSAETLWPISSTLVHRRNISLLSTATLTAKTLTPSLGCFSKSTEDKQWTEAETIVSDSDTGSREEENETSSQISVSTNGRVDSQSRRTATTAFGDSVSLGIREPVYEVVEVKSNGALSTKKINRRQLLKMSGLRPRDIRSVDPSLFLTNSMPSLLHIVLHLFISISKGGKAFLETLLPRLNPKNSNGGPSMPFELEVVEAALLSRTQRLEQRLMDLEPRVQALLEVLPNRLTGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGSNCTLKRGSDVVECSVPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGAVITFFLMYYYLKARKIL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0540 443 MobiDBLite consensus disorder prediction 78 107 - -
Prci6g0540 443 Pfam CorA-like Mg2+ transporter protein 325 433 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Prci6g0540 443 CDD Mrs2_Mfm1p-like 134 442 IPR039204 -
Prci6g0540 443 MobiDBLite consensus disorder prediction 93 107 - -
Prci6g0540 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 379 434 IPR045863 -
Prci6g0540 443 FunFam Magnesium transporter MRS2-11, chloroplastic 192 374 - -
Prci6g0540 443 Gene3D - 127 188 - -
Prci6g0540 443 Coils Coil 323 343 - -
Prci6g0540 443 Gene3D Magnesium transport protein CorA, transmembrane region 190 374 - -
Prci6g0540 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 98 443 IPR039204 -
Prci6g0540 443 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0540 Prci-Chr6 3462702 3471366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0540 125 443 MRS2 Gene Family AT5G22830 77.745 3.17e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0540 K16075 - gmx:100807024 600.127