Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0514 ATGGCTGTGCTACAGGAGAGAATGAATGAAATGCAGAGAATGTTGGAGGCCTGCATGGATATGCAGCTTGAGCTGCAACGCTCATTAAGGCAGGAAGTTTCTGCAGCACTTCATTCCTCAGATGATGGGTCAACAAGGTTGCAAGACCATGATTCCCGAGAAGATAAATCTAAGTGGGAGTGTGTGAGGAAAGGACTTTGCTGTATATGTTGTGAGAGCAGTATTGATTCTTTATTGTACAGATGTGGGCACATGTGTATGTGCTTGAAATGTGCGAATGAATTGTTGGAAGGCAAGAGAAAGTGCCCAATGTGTCGAGCACCTGTGGTGGAGGTGGTACATGCTTATGCGATAGTATAA 360 0.4472 MAVLQERMNEMQRMLEACMDMQLELQRSLRQEVSAALHSSDDGSTRLQDHDSREDKSKWECVRKGLCCICCESSIDSLLYRCGHMCMCLKCANELLEGKRKCPMCRAPVVEVVHAYAIV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0514 119 ProSiteProfiles Zinc finger RING-type profile. 67 106 IPR001841 -
Prci6g0514 119 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 118 - -
Prci6g0514 119 Coils Coil 1 21 - -
Prci6g0514 119 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 117 IPR013083 -
Prci6g0514 119 MobiDBLite consensus disorder prediction 34 55 - -
Prci6g0514 119 SUPERFAMILY RING/U-box 66 112 - -
Prci6g0514 119 Pfam Zinc finger, C3HC4 type (RING finger) 64 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0514 Prci-Chr6 3346252 3346785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0514 67 113 C3H Transcription Factor Family AT3G06140 42.553 1.65e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0514 - - pcin:129313212 251.136