Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0507 ATGGCGAACGGTAAGGATTCCGATGAGTTCCTGGTGTTATCGAGGGTGCGGACGGGTCTGAAGAGGGAGTTTGCATTCGCCATGAAGGCGCAGTCCGAGATCTGTGGATCTTTGGGACGGACCCGCGGCAGCAAAAACAAAAATGGGGTTCAAGATAGTCCTGTCAACAAGAGGTCCAAGAAATCTAGTTCCTCTAGAGACGAGCAGAATGGCGCGCAGCTGGTGCCGGAGGATGTTGTCGCACCCATTGTTTTGGAAGATGTCAAGGGAAAGGAGGTAAAGGCTGTAGAGGATATGGAGGATGTTATGAGCGAGGAGGAGGCTAAAAGTGATGTGGTGGATCTATCGGGTGACGACGAACCCAAGAACCCAGTGAGTGAGCCGATGGTTAAGAGGGAACCCATGGATGAGGCTGCAGTGCCCATTTGTGATGAAGAGCCCAAGGGCGATGATGTAGAAACTTTGAGCGACGATGAGCCGAAGAGTATTCCTACGCCGGAATCACTGAAGGAAGCTACAATGGAAGATATAGCCCAACCAATTTGCCAACACGAGTCCAAGGAACATCAAACTAACGAAGACGATTTACAGAAGTCTTTAACGACCGAGAACCTGAGCGGGGGAGAGACTTGTTCTCCAGAGGAAAAGGGCGCTAATGTGACTACTCCCGTATTGCTTAATGATCACAACAAGGTGAAGGGGCCACCGAGGCGGTTTACACGGTCGGCTCTAAGACAACAGCAAGATGATCCGAAGCTATCAAATGATGGAAAAGAAGCTTGTGATGGAGCCATTGGATTTGGTGATGTTAAGAGGGAAAGCGAGGATGCTTCATTAATCACTACGCCAACTCAAATAAAAATGTCGAAGAAGAGTGCCTTGAAGAAGTTCCCGACGAAGCTAAAGGACCTTCTAGCTACGGGGATTCTTGAGGGTCTACCTGTCAAATATGTTCGGGGAGTGAAGGCACGAAGACCTGGAGAAACTGGGCTCCGAGGAGAGATTAGACGCTCAGGGGTTTTGTGCTATTGCGAAGTTTGTAACGGGGTTGAGGTTGTCTCACCCACCGTGTTTGAGCTGCATGCTGGTAGTGCAAACAAACGTCCCCCAGAGTACATATACCTCGAGAATGGGAATACGCTCCGTGATGTCATGAATACATGCTCGAACGTTCCCATGGATGTTTTGGAGGAAGCAGTACAGAAAATCCTTGGGGGCTTCTCCCTTAAGAAATCTGCAATCTGTTTGAATTGCAGAGTGGCAATATCTCAAGCTGGCACGGGATCGTCAAGACTACTATGTGATACTTGTGCGGGGTTAAAAGAGTCTCAACCTAGCCATATTCAAATAACTGACGCTAGCAATTCCTGTTCTCCGCCTGCAGTTACTCTCAGATATCCCAGGTCTCCAGAACCAGTTGTTGTTCCATCGACATTAAACAGTGGGATGAAGCACACTTCTTCTCATGGCAAGAGTCAAGGAAGAATAACTAAAAAGGATCTGCGGTTACATAAATTGGTTTTTGAGGAAGATGTGTTGCCAGATGGGACTGAAGTCGCCTACTATGCTCGTGGACAGAAACTCTTGGTGGGTTACAAAAGGGGGTATGGAATTGTTTGTAGCTGCTGTGACTCTGAGGTAAGTCCCTCACAATTTGAAGCTCATGCTGGTTGGGCATCGCGACGCAAGCCTTATCTGCACATATACACTTCCAATGGAGTCTCTCTCCATGAATTGTCCATTTCCTTATCCAAAGGTCGGAGGTTTTCTACCAATGAAAATGATGATCTCTGCAGCATATGCTCGGATGGAGGGAGTCTTTTGTGTTGTGATGGATGCCCAAGGGCCTTTCACATAGACTGTGTTCCTCTGCTATGCATTCCGACTGGCACTTGGTATTGTAAATATTGCCAGAACCTGTTCCAGAAAGACAAATATGTGGAGCATAACATGAATGCATTGGCAGCAGGAAGGATGGCGGGGGTTGATCCTTTAGAGCAGATAAACCAAAGATGCATTCGCATTGTCAAATCTGTAGAGATTGACCATGGTGGATGTGCATTATGCAGAAGCCATGATTTCAGCAGAAGCTTTGGTCCTCGCACAGTGATTATATGTGATCAGTGTGAAAGGGAATATCATGTAGGCTGTTTGAAGGAGCATAACATGCAGAACTTAGAGGAATTGCCTGAAGGAAATTGGTTCTGCTGTACTGATTGCAGTCAGATTCATTCTTCTCTGCTTAATTTGGTCTCTTGTGGGGCGGAGAATCTTCCGGATTCTCTTTTAAGTATGATACAAAAGAAGCATGAAGAGAGCCAAGAAAATGGGGGTGGTCTAGATATAAAATGGAGAATCTTAAATTGGAAACTGGCTGCTTCTGATGAAACTAGGCAACTGCTTTCCAAGGCTGTTGCAATCTTCCATGAGCGGTTTGATCCAATAGTTGATGCAAGTTCAGGCCGTGATTTCATTCCGACAATGCTTTATGGTAGGAATATCAGGGGTCAAGATTTTGGTGGGATGTACTGTGCAGTGCTAACAGTCAACAAAGTGGTTGTTTCTGCGGGCATATTTCGTATATTTGGAGCAGAGGTGGCAGAGCTTCCCTTAGTGGCAACAATTGCAGATTGCCAAGGACAGGGTTACTTCCAGTCCTTGTTTTCTTGCATTGAAAGGCTGCTTGGATCTTTAAATGTGAAACAGTTTGTCCTGCCAGCTGCTGAAGAAGCTGAATCAATATGGACAAGTAAATTTGGTTTTACAAAGTTAGAACAAGATGAGGTAAACAATTACAAGAGATATTATCACATGATGATATTTCAGGGGACATCAGTGCTGAGGAAATCTGTTCCTGCACCACCCGACGTGCGCGTGAATGCTGTGTGA 2889 0.4618 MANGKDSDEFLVLSRVRTGLKREFAFAMKAQSEICGSLGRTRGSKNKNGVQDSPVNKRSKKSSSSRDEQNGAQLVPEDVVAPIVLEDVKGKEVKAVEDMEDVMSEEEAKSDVVDLSGDDEPKNPVSEPMVKREPMDEAAVPICDEEPKGDDVETLSDDEPKSIPTPESLKEATMEDIAQPICQHESKEHQTNEDDLQKSLTTENLSGGETCSPEEKGANVTTPVLLNDHNKVKGPPRRFTRSALRQQQDDPKLSNDGKEACDGAIGFGDVKRESEDASLITTPTQIKMSKKSALKKFPTKLKDLLATGILEGLPVKYVRGVKARRPGETGLRGEIRRSGVLCYCEVCNGVEVVSPTVFELHAGSANKRPPEYIYLENGNTLRDVMNTCSNVPMDVLEEAVQKILGGFSLKKSAICLNCRVAISQAGTGSSRLLCDTCAGLKESQPSHIQITDASNSCSPPAVTLRYPRSPEPVVVPSTLNSGMKHTSSHGKSQGRITKKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLVGYKRGYGIVCSCCDSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSISLSKGRRFSTNENDDLCSICSDGGSLLCCDGCPRAFHIDCVPLLCIPTGTWYCKYCQNLFQKDKYVEHNMNALAAGRMAGVDPLEQINQRCIRIVKSVEIDHGGCALCRSHDFSRSFGPRTVIICDQCEREYHVGCLKEHNMQNLEELPEGNWFCCTDCSQIHSSLLNLVSCGAENLPDSLLSMIQKKHEERXQENGGGLDIKWRILNWKLAASDETRQLLSKAVAIFHERFDPIVDASSGRDFIPTMLYGRNIRGQDFGGMYCAVLTVNKVVVSAGIFRIFGAEVAELPLVATIADCQGQGYFQSLFSCIERLLGSLNVKQFVLPAAEEAESIWTSKFGFTKLEQDEVNNYKRYYHMMIFQGTSVLRKSVPAPPDVRVNAV 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0507 963 FunFam PHD finger family protein 782 951 - -
Prci6g0507 963 ProSitePatterns Zinc finger PHD-type signature. 598 637 IPR019786 -
Prci6g0507 963 MobiDBLite consensus disorder prediction 37 58 - -
Prci6g0507 963 MobiDBLite consensus disorder prediction 35 195 - -
Prci6g0507 963 MobiDBLite consensus disorder prediction 106 165 - -
Prci6g0507 963 SMART PHD_3 597 638 IPR001965 -
Prci6g0507 963 SMART PHD_3 685 741 IPR001965 -
Prci6g0507 963 MobiDBLite consensus disorder prediction 181 195 - -
Prci6g0507 963 Pfam Tify domain binding domain 333 388 IPR032308 -
Prci6g0507 963 Pfam Tify domain binding domain 532 579 IPR032308 -
Prci6g0507 963 Gene3D - 782 950 - -
Prci6g0507 963 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 680 743 IPR013083 -
Prci6g0507 963 SUPERFAMILY FYVE/PHD zinc finger 677 742 IPR011011 -
Prci6g0507 963 CDD PHD1_AIRE 597 637 - -
Prci6g0507 963 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 584 661 - -
Prci6g0507 963 SUPERFAMILY FYVE/PHD zinc finger 585 640 IPR011011 -
Prci6g0507 963 ProSiteProfiles Zinc finger PHD-type profile. 595 640 IPR019787 -
Prci6g0507 963 PANTHER AUTOIMMUNE REGULATOR 78 951 - -
Prci6g0507 963 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 584 671 IPR013083 -
Prci6g0507 963 MobiDBLite consensus disorder prediction 226 259 - -
Prci6g0507 963 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 841 942 IPR016181 -
Prci6g0507 963 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0507 Prci-Chr6 3312887 3319703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0507 286 952 PHD Transcription Factor Family AT2G36720 47.196 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0507 - - pcin:129313514 1936