Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0506 ATGGGTCAGATCCAATATTCTGAGAAGTATTTCGATGATACTTATGAGTATAGGCATGTGGTTCTACCTCCTGAAGTGGCCAAACTTCTTCCCAAGAATCGTCTTCTTTCTGAAAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGCCGTGGTTGGGTTCATTATGCAATTCATCGTCCTGAGCCACACATAATGCTCTTCAGGAGGCCGCTGAACTATCAGCAACAGCTGGAAAACCAGGCTCAGCAAAACATGCTTGCCAAGTGA 267 0.4569 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQLENQAQQNMLAK 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0506 88 FunFam Cyclin-dependent kinases regulatory subunit 1 84 - -
Prci6g0506 88 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Prci6g0506 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Prci6g0506 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Prci6g0506 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Prci6g0506 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Prci6g0506 88 SMART CKS_2 3 72 IPR000789 GO:0016538
Prci6g0506 88 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Prci6g0506 88 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Prci6g0506 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 3 84 - -
Prci6g0506 88 Gene3D - 1 84 IPR036858 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0506 Prci-Chr6 3308608 3310354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0506 1 82 Core Cell Cycle Gene Families AT2G27970 91.463 9.32e-53 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0506 K02219 - egr:104421234 176.792