Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0479 ATGCAGAGATCTGGTTATGGCCGTGATGGAATTTACAGGTCTCTCAGGCCCCCTCTCGTGATTCCCAGGGACGAGAACCTCTCTCTCGTTTCATTTCTCTTCAGAAATGTCGCCTCTTTCCCCACCAAACCAGCCTTGATTGACGCCGATTCCTCTCAAACTCTGTCTTTCGGTCAGTTGAAGTCCTTGGTGGTGAAAGTCTCCCACGCCTTTCTCCACCTTGGCATCAAGAAAAACGACGTCGTCCTCTTGTTTGCGCCCAACACCATCCTCTACCCCGTCTGCTTCCTCGGCATCGCGGCCATTGGCGCCATAGCCTCCACCGCCAACCCTACCTACACGGTCGCGGAGGTTTCCAAGCAGGTGAAAGATTCCAATCCCAAGCTCCTGATCACCGTCCCTGAATTGTGGGACAAAGTGAAGGGTTTCAATCTCCCCTCGGTGATTTTGGGTTCACAGACCCCTTCCCTCGTCGCGTCGAATTCCAAGATTACGACCTTCGATGGATTGCTCGAGTTTGCCGGTTCTCCCACGGAATTTCCGGCCAGTAATGTCAAACAGAGCGATACGGCGGTGCTTCTCTATTCTTCGGGTACTACGGGTGTCAGTAAGGGGGTGATTCTCACGCATAAGAATTTCATAGCCGCTTCTCTTATGGTGGGCATGGATGACGAGTTGGCTAACGAGAGACACGATGTCTTTCTTTGCGTTCTCCCGATGTTTCATATTTTTGGGCTCTCAATCATTACGTACTCGCAGCTTCGGAGAGGCAACGCGGTCGTGTCTATGAAGAAATTTGACTTCGAAATGATGTTGAGGGCGGTTGAAAAGTATAGCGTGACTCGTTTATGGGTTGTGCCTCCAATCATCCTTGCTCTGGCAAAGCAGAGCGTGGTGAAGAAGTATAATCTTTCGTCATTGAAGCAAATTGGTTCCGGAGCTGCTCCTCTGGGAAAAGAATTGATGGAAGAGTGTGCTAAAAAATTCCCTCAGACTTTGGTCATGCAGGGCTATGGTATGACAGAAACTTGCGGCATTGTTTCCGTGGAGAATTCAACAATGGGTATTCGTCATAGTGGTTCAGCAGGAATGCTTGTTTCAGGAGTTGAGGCTCAAATAATCAGTGTGGATACGTTGAAGCCCCTCCCTCCTCGTCAGTTGGGTGAGATATGGGTACGGGGTCCTAATATGATGCAAGGTTATCACAACAATCCACAGGCCACCAGATTAACTATAGATAAAATGAGATGGGTGCATACGGGAGATCTTGGATATTTTGATGAGGAAGGGCAACTTTATGTTGTTGACCGTATCAAAGAACTCATCAAGTATAAAGGTTTTCAGGTTGCACCAGCAGAACTTGAAGGACTTCTTGTTTCTCACCCTGAGATAATGGATGCTGTTGTCATCCCGTATCCTGATGCTGAGGCCGGTGAGGTCCCTGTTGCCTATGTTGTTCGTTCGCCCAATAGTTCACTGACTGAAGAAGACGTTCAGGAGTTTATTGCTGATCAGGTTGCGCCTTACAAAAGACTGCGAAGGGTGACGTTCATCAACGCCGTTCCGAAGACAGCTTCTGGAAAAATTCTCAGAAGAGAGCTTATTCAGAAAGCACGATCCAAAATATGA 1629 0.4837 MQRSGYGRDGIYRSLRPPLVIPRDENLSLVSFLFRNVASFPTKPALIDADSSQTLSFGQLKSLVVKVSHAFLHLGIKKNDVVLLFAPNTILYPVCFLGIAAIGAIASTANPTYTVAEVSKQVKDSNPKLLITVPELWDKVKGFNLPSVILGSQTPSLVASNSKITTFDGLLEFAGSPTEFPASNVKQSDTAVLLYSSGTTGVSKGVILTHKNFIAASLMVGMDDELANERHDVFLCVLPMFHIFGLSIITYSQLRRGNAVVSMKKFDFEMMLRAVEKYSVTRLWVVPPIILALAKQSVVKKYNLSSLKQIGSGAAPLGKELMEECAKKFPQTLVMQGYGMTETCGIVSVENSTMGIRHSGSAGMLVSGVEAQIISVDTLKPLPPRQLGEIWVRGPNMMQGYHNNPQATRLTIDKMRWVHTGDLGYFDEEGQLYVVDRIKELIKYKGFQVAPAELEGLLVSHPEIMDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDVQEFIADQVAPYKRLRRVTFINAVPKTASGKILRRELIQKARSKI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0479 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 537 - -
Prci6g0479 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 439 - -
Prci6g0479 542 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Prci6g0479 542 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Prci6g0479 542 Gene3D - 440 541 IPR045851 -
Prci6g0479 542 Pfam AMP-binding enzyme 34 444 IPR000873 -
Prci6g0479 542 SUPERFAMILY Acetyl-CoA synthetase-like 19 540 - -
Prci6g0479 542 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Prci6g0479 542 CDD 4CL 21 534 - -
Prci6g0479 542 Gene3D - 10 439 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0479 Prci-Chr6 3127551 3132627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0479 1 542 Monolignol Biosynthesis Gene Families AT4G05160 68.934 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0479 K01904 - qsa:O6P43_000369 863.988