Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0460 ATGAACAATATAATCAGGAGGGTTGCTTTGGCTTTCATTGTTGCATTAAGCTGCTATTCGGAGCAAGTTTCATGTCAGAACAGCAATAAAAGCCAAGCTGCGGTTCAGCTCGTAGCCCAGGCCGTTTATGGAAGCATGTCTAGTTTCACGGGCGTCTTCAAGGACGAAATAAAAAAGAATCTGGGGTTTTGTATAGTTGATGTAGATGCTGATTGGGATGGGGCATTTAATTTCACAAATGATCTGACATTTTTGACCTCATGTTCCCAATCTTTAAAAGGAGATATTTCACAGCGCATATGCACAGCAGCAGAAATAAAGTTATATGCCAGTGGTTTTGACATAAAGTCAAAGAGCCAATCTAACAACTTGCAGCCCAACAAAAACTGTAACTTGAGCGTTTGGCTTAATGGATGTGAGCCTGGATGGGGATGTAGTGCTGCTGAGAAAGTTCAACTTAACAATACTAAGGACATCCCTGTCAGGTCTACTGACTGTCAACCTTGTTGTCCGGGTTTCTTTTGCCCACGCGGCATTACTTGCATGATACCTTGCCCTCTGGGTGCTTACTGTCCACGCGGACAGCTCAATCAAGCTACTGGGATATGCGAACCGTATCATTATCAGCTACCTGCTGGAAAGACAAACCATAGTTGTGGTGGAGCAGATGTTTGGGCAGACATTTCAAGCAGTTGGGATGTTTTTTGTTCAGCCGGATCTTACTGTCCATCTACGATCCAAAAAAATCCTTGCACCCAGGGACATTATTGCAGGACGGGTTCAACTGATCAAGAAAGTTGTTTCAAATTGGCAAGTTGTAAGCCTCAGTCAGCTAATCAAAATATAACTGCATATGGTGTCATGGTTTTCGCTGGCTTGAGCTTCTTGCTTATCATCATATATAACTGTTCTGACCAAGTTCTTGCAACTCGAGAAAAAAGAATAGCAAAATCAAGAGAAAGGGCTGCTGCAAGTGTAAGAGAAACACAAGCACGTGAAAAATGGAAATCAGCAAAAGATATTGCTAAGAAGCATGCAGTAGGACTGCAAACTTCTTTATCACGTACATTTTCTCGTAGAAAATCTATGAAGGGAGACTTGAAAGCTTTTAATTCTAAATCTGCATCAGAAACTCCCTTACCACCTGTGCCACCAGAAAGTGCTGGTACATCATCTGCAGCATCAAAAGGAACGAAAAAAGATAAGAACAGCCTCACAAAAATGATCCAGAAAATTGAGGAAGACCCTGATAGTCAGGAAGGCTTTAATGTTGAGATAGGAGATAAAAATATCAAAAAGCAAGCACCAAAGGGCAAGCAATTGCATACGCAAAGCCAAATTTTTAAGTATGCGTATGGTCAGATTGAAAAAGAAAAGGCTTTACAAGAACAAAATAAGAACCTAACCTTCTCTGGAGTTATTTCAATGGCTAGTGATATTGAGATCAGGAAGAGGCCTACAATTCAGGTTGCTTTTAAAGATTTAACTCTCACTTTGAATGCCAAAAACAAGCATCTTCTAAGATGTGTGACTGGGGAACTACACCCTGGTCGAGTTTCAGCAGTCATGGGCCCATCTGGGGCTGGTAAAACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCATACAACTGGCTTAGTTCTTATAAATGGCAAGGTTGAATCTATCCGATCATACAAGAAGATCATTGGGTTTGTGCCGCAAGATGATATTGTGCATGGCAATTTGACAGTAGAAGAGAATCTGTGGTTCAGTGCCAGATGCAGACTTTCAGCTGATCTACCGAAAGCAGAGAAGGTTCTAGTAGTTGAAAGAGTTATTGAGTCATTAGGTCTGCAAGCAATCCGAGATTCTCTGGTTGGAACGGTGGAGAGGCGTGGAATTTCTGGAGGGCAAAGAAAACGAGTGAATGTAGGACTGGAAATGGTTATGGAACCTTCACTCCTGATTTTAGATGAACCAACATCTGGCTTAGATAGTTCATCTTCTCAGTTATTGCTTAGAGCACTTAGACGCGAGGCTCTAGAGGGTGTAAATATATGCATGGTCCTTCACCAACCAAGTTACACACTGTTCGAGATGTTTGATGATTTTATACTACTCGCTAAAGGTGGTCTTACAGTGTATCATGGACCGGTGAAGAAAGTTGAAGAGTATTTTTCCAGCTTGGGGATTGTTGTTCCTGATCGTGTTAATCCTCCAGATTATTACATAGACATTTTAGAAGGGATAGTAAAACCAAGCTCAAGCACAGCAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTATCCTGTTCCTTTGGACCTGCTTCATGGTGTTGAAGGAGTGGGAGGCACAAGTGGTGAAAGTTCCACACATGGGGCAGCAACTCCAGCCACAGAAGCTGAAGATCCGTCTTTAGCTGGGGAAATTTGGCAAGATGTAAAAGTCAATGTTGAGAAGAAGAAAGACTACCTTCGATATACTTTCTTTTCTTCACATGATTTATCCAATCGGGTAACCCCTGGAGTCTTCCAACAATATAGATACTTTCTCGGAAGGTCTGGGAAACAGCGGCTGCGAGAAGCTAGAACCCAGGCTGTGGATTTTCTAATTTTGTTACTAGCTGGAATATGCTTAGGAACACTTGCCAAAGTGAGTGATGAAACGTTTGGAGCAAATGGTTACACGTATACTGTTATAGCAGTATCACTCCTGTGCAAGATTGCGGCTTTGAGAACATTTTCACTGGATAAGTTGCACTACTGGAGAGAGAGTGCATCTGGCATGAGTAGCCTGGCTTACTTTCTTGCAAAGGATACAGTCGATCATTTTAATACACTCATAAAGCCTGTGGTCTATCTCTCAATGTTCTATTTCTTCAACAATCCTAGATCCTCTGTTGTAGATAACTACTTTGTTTTGCTGTGCTTGGTGTACTGTGTCACTGGCATAGCTTATATATTGGCGATCTCACTTGAACCTGGCCCCGCCCAGTTGTGGTCGGTTTTACTTCCAGTAGTTTTGACTCTCATAGCAACCAGTGATAGTGTAGCCGAGAGCTCCTTTATGAGCAAGGTAGCTGACGTATGCTATGCTAAGTGGGCTCTTGAAGCATTTGTGATATCAAACGCTAGAAGATATGCTGGGGTTTGGTTAATAACCCGATGTGGCGCGCTGGATCTCCGTGGCTACGATCTCAACAACTGGTATCAATGTCTTATTTTTCTTGTGGTAACCGGAGTACTAAGCCGCATTGTTGCATTCTTTTGTATGATCACCCTCCAGAAGAAATAA 3300 0.4203 MNNIIRRVALAFIVALSCYSEQVSCQNSNKSQAAVQLVAQAVYGSMSSFTGVFKDEIKKNLGFCIVDVDADWDGAFNFTNDLTFLTSCSQSLKGDISQRICTAAEIKLYASGFDIKSKSQSNNLQPNKNCNLSVWLNGCEPGWGCSAAEKVQLNNTKDIPVRSTDCQPCCPGFFCPRGITCMIPCPLGAYCPRGQLNQATGICEPYHYQLPAGKTNHSCGGADVWADISSSWDVFCSAGSYCPSTIQKNPCTQGHYCRTGSTDQESCFKLASCKPQSANQNITAYGVMVFAGLSFLLIIIYNCSDQVLATREKRIAKSRERAAASVRETQAREKWKSAKDIAKKHAVGLQTSLSRTFSRRKSMKGDLKAFNSKSASETPLPPVPPESAGTSSAASKGTKKDKNSLTKMIQKIEEDPDSQEGFNVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMASDIEIRKRPTIQVAFKDLTLTLNAKNKHLLRCVTGELHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGLVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKAEKVLVVERVIESLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFEMFDDFILLAKGGLTVYHGPVKKVEEYFSSLGIVVPDRVNPPDYYIDILEGIVKPSSSTAVNYKQLPVRWMLHNGYPVPLDLLHGVEGVGGTSGESSTHGAATPATEAEDPSLAGEIWQDVKVNVEKKKDYLRYTFFSSHDLSNRVTPGVFQQYRYFLGRSGKQRLREARTQAVDFLILLLAGICLGTLAKVSDETFGANGYTYTVIAVSLLCKIAALRTFSLDKLHYWRESASGMSSLAYFLAKDTVDHFNTLIKPVVYLSMFYFFNNPRSSVVDNYFVLLCLVYCVTGIAYILAISLEPGPAQLWSVLLPVVLTLIATSDSVAESSFMSKVADVCYAKWALEAFVISNARRYAGVWLITRCGALDLRGYDLNNWYQCLIFLVVTGVLSRIVAFFCMITLQKK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0460 1099 SMART AAA_5 516 717 IPR003593 GO:0016887
Prci6g0460 1099 Gene3D - 479 727 IPR027417 -
Prci6g0460 1099 MobiDBLite consensus disorder prediction 364 404 - -
Prci6g0460 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 713 IPR027417 -
Prci6g0460 1099 Pfam ABC-2 type transporter 688 1099 IPR043926 GO:0140359
Prci6g0460 1099 FunFam ABC transporter G family member 24 484 726 - -
Prci6g0460 1099 Pfam ABC transporter 510 659 IPR003439 GO:0005524
Prci6g0460 1099 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 238 1087 - -
Prci6g0460 1099 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Prci6g0460 1099 CDD ABCG_EPDR 488 714 - -
Prci6g0460 1099 ProSitePatterns ABC transporters family signature. 631 645 IPR017871 GO:0005524|GO:0016887
Prci6g0460 1099 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 490 731 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0460 Prci-Chr6 2988917 2995184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0460 517 720 Calmodulin-binding Proteins AT2G36910 27.803 5.14e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0460 - - gmx:100794093 1707.96