Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0459 ATGTGTAAAACCAAAATGGCCGTCGACGCTTTCACCCCTAACTCAAGAGCTCCATCATCTTCCAGACCCACCCTACCCACCCCCGCCGCGGCCGCAGCTTCTTCCTTTGACCCCTCTACCTCTTTCACCAGCTCTGCCGTTTACTCTGGCTCCTCCGGTTTCAAACTCACCTCCGACACCTCTATTTCGAGCGGAGCCTCTCTCGCTAGTTTCCGAGACAGCCTCCCTGAAAACCCCCACATCTATGACTTCTCTGAAATTTGCTCCGCCACCAACAATTTCCTCGCCAAGCGTTATTCCTCCTCCTCTTCTACTCCCTCTTGGCGATGTACTCTCAGAGGCAGAGACGTCATTGTTTTCCAGCGCAAATTTCGTCGCAAACTCCAGACGAATCAGAATGAACTCAGAGAACGTCTCTCTGTGATCTGCCGTAGTCATCACGTCAGCATCATCAAGCTTGTTGGTGCTTGCATCTCGGGCGATCACATCTACCTCGTGTACGACTTCGTGAACGGGGCTAATCTCTCCGACTGCTTGAGAAATACGAAGAACCTTAACTTCACGGTTCTGTCCAGCTGGATTTCTAGAATGCAGGTTGCTACGGATCTCGCCGAAGGGCTCGATTACATTCACAACAAGACCGGCTTAAACCTAAACTTCGTGCACAATCACATCAAGAGCAGTGCGATAATCGTGACGGAACCTTCGTTCAACGCCAGGATTTCTCACTTCGGCGCCGCCCAGCTGTGCGGTGAGATCGACGAAGAGAGCGAAAATGCTAAACAGATGGAAGAGATTGCAGAGGAGTCATCTTCCTCCCAATCTTTCACGAAATCAAAGGGCGTAACACGATCGAGAAGCTCTAACATGCAATTCGAGGGCGTAAGAGGGTACATGGCACCGGAATACCAATCCTCCGGCATGGCAACCCAGAAGTCCGACGTGTACGCTTTTGGGGTAGTGATCTTGGAGTTGCTATCGGGAGACGAACCGTTGAAGTTCAAATACAATAAGAAGACCGGCGAATTCGTGAGCAACTCGGTGATCGATACGGCGAGGGCCGTTCTCGACGGCGGGGGTGGCCTGGGAGGGAGGCTGAGGAAATGGGTGGATCGGAGGCTGAAGGACTCGTTCCCGGTCGAGGTGGCAGAGGAAGTGGCACGTGTAGCACTGGATTGCGTACACGTGGACCCAGATAAGAGGCCCAGTATGGGACGCGTTGCTGGAAAAATCTCGAGGCTATATCTGAAGTCTAGGATTTGGTCCGATAGGATGAGGACGCCCACCGATATTCTTTCAACCTCGTTCGCCCCTAGATGA 1320 0.525 MCKTKMAVDAFTPNSRAPSSSRPTLPTPAAAAASSFDPSTSFTSSAVYSGSSGFKLTSDTSISSGASLASFRDSLPENPHIYDFSEICSATNNFLAKRYSSSSSTPSWRCTLRGRDVIVFQRKFRRKLQTNQNELRERLSVICRSHHVSIIKLVGACISGDHIYLVYDFVNGANLSDCLRNTKNLNFTVLSSWISRMQVATDLAEGLDYIHNKTGLNLNFVHNHIKSSAIIVTEPSFNARISHFGAAQLCGEIDEESENAKQMEEIAEESSSSQSFTKSKGVTRSRSSNMQFEGVRGYMAPEYQSSGMATQKSDVYAFGVVILELLSGDEPLKFKYNKKTGEFVSNSVIDTARAVLDGGGGLGGRLRKWVDRRLKDSFPVEVAEEVARVALDCVHVDPDKRPSMGRVAGKISRLYLKSRIWSDRMRTPTDILSTSFAPR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0459 439 ProSiteProfiles Protein kinase domain profile. 56 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0459 439 MobiDBLite consensus disorder prediction 12 40 - -
Prci6g0459 439 Pfam Protein kinase domain 128 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0459 439 Coils Coil 246 273 - -
Prci6g0459 439 Gene3D Phosphorylase Kinase; domain 1 57 169 - -
Prci6g0459 439 PANTHER OS09G0572100 PROTEIN 1 439 - -
Prci6g0459 439 MobiDBLite consensus disorder prediction 13 40 - -
Prci6g0459 439 SUPERFAMILY Protein kinase-like (PK-like) 108 407 IPR011009 -
Prci6g0459 439 Gene3D Transferase(Phosphotransferase) domain 1 171 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0459 Prci-Chr6 2985859 2987559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0459 77 433 Receptor kinase-like Gene Family AT1G51940 30.278 5.03e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci6g0459 Pkinase 5.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0459 - - gmx:100792694 549.666