Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0454 ATGATTCATCTCTGGTTCATTGCCTCACTATGCATCAGTTCAAGTTCTGCTCAGGCAGCTCAGCAATTCTATGACTCTACAAATTGTTCTACATATCCTGACACCTACCCAGGTTCGAGGTACACTTGTAAAACTCCCCAAGATCCATGCGAAACATACTTGGTGTTCAGATCGAACCAACGTTTTCATAATCTTTCAGAGATCTCAAAGCTCTTCAATTTGAACCCTGATACACTGCTTCAAAAAAATAGCCATCTCAATTCTTCTTCTCAGTTCCTTGAGGCAGGCAAAGAGGTTCTTATTCCTGTCACTTGTTCCTGCTCTGGCGATTTCTATCAAGTCAGTTTCAGATATATAGTCCCCGAAAATACAACATTTTCAGAGATTGCTTGTGGAGTTTATGAAGGGCTGCTCAAATCTTTCACACTCGAACAGGACAACCTTAATAAAACCATAGCTGGTGCTGAGCTTAATGTTCCTCTTAGATGCGCATGTCCTGACAATTCCACTGCGCTTGGTAAGAAGGTGAAATATCTTGTTACATACCCCATAATACGAAAAGATTCAGACAGTGACATAAGCGCGAAATTTGGCATCTCAGAGGAAGATTTCTTTGAAGCCAATGACTTGCCTCAATTTTCAACTCTTTTCGCACAAACAACTGTTTTGGTCCCATTAAGAGATGGTCCAATCAAGATTACTGATATTCCAGAGTCATCTCCAGCTCCAACTTCTGGTTTTCTTCCAACACTTCCAGTGGCGAAAACAGAGAGATTCAAAAATCCTACCAGTCTGTACATCGCGGGTTCTGTGATAGGATTTTTGCTGTTAATCATGGCAATTGTTGTGAGTGTATTGTGCATTAAGGCCTTAAGGAAATGGAAGAGCGAAAGTGTTCAACCCTTCACTCCTTCAACCTCCGTTGTCATGCCGCCAATGAGAGGCTCTTCAACAACTTCATGTCTTTCTCCGGATTTTCTCGCCGGAATAAAGTACTGCTTGGTCAATTACAGCATAGAAGAGCTCAGGATGGCCACAAAAGATTTCAGTGAAGAAACCCAGATAAGTGGTTCAGTCTATAAGGGGTTGATCAGTAATCTGGAGATGATGATCAAGAGGATGAGATTTGAAGACACACGTCGGCTAATTGATTTACATTCTAAGATCAACCACATCAATGTTGTGAACTTACTTGGTGTTTGTTATGATGAAAGAGATTTGTTATGGTCTTATTTGGTTTTTGAATGGCCTAAAAATGGGTGCTTAAGGGACTGTTTATCAGATGCATGCAACCTCCTCTGTTGGAAAGAAAGGACACAAATAGCTTCTGATATAGCTACAGGTCTTCACTATTTCCACCGCTGTGCATTTCCTTCTTACGCTCATTTGAATGTTAGCAGTAGAAATATATTTATAACAAAAGACTTTAGGGGGAAACTGGCAGATATTGCTGCACCAGATAATCTTGTAAACGGCCCAGTTTCTGAGAAAGAAGACATTTTTGCATTTGGGGTTGTGTTACTTGAACTGATCTCTGCAAGAGAGAACATTGAAGGGAAATTAGTGAAGGATTCTGTTGGGTTCTTGGGAGGAGCAGGCAATGAAGGGGGTTGCTTTGAAGGGTTGAGGAGTTTCATGGATCCTAATCTGAAGGATTATCATCTTGCAGAGGCTCTGTGTTTGGCTGTTCTAGCAAAGGCTTGTGTAGCTGATGATCCCTTGCATAGACCAACCATGGATGATATCATGAAGGTCCTCGCAAAAACCGTTTCTCCACGACAACCAGAGAAATAA 1794 0.4136 MIHLWFIASLCISSSSAQAAQQFYDSTNCSTYPDTYPGSRYTCKTPQDPCETYLVFRSNQRFHNLSEISKLFNLNPDTLLQKNSHLNSSSQFLEAGKEVLIPVTCSCSGDFYQVSFRYIVPENTTFSEIACGVYEGLLKSFTLEQDNLNKTIAGAELNVPLRCACPDNSTALGKKVKYLVTYPIIRKDSDSDISAKFGISEEDFFEANDLPQFSTLFAQTTVLVPLRDGPIKITDIPESSPAPTSGFLPTLPVAKTERFKNPTSLYIAGSVIGFLLLIMAIVVSVLCIKALRKWKSESVQPFTPSTSVVMPPMRGSSTTSCLSPDFLAGIKYCLVNYSIEELRMATKDFSEETQISGSVYKGLISNLEMMIKRMRFEDTRRLIDLHSKINHINVVNLLGVCYDERDLLWSYLVFEWPKNGCLRDCLSDACNLLCWKERTQIASDIATGLHYFHRCAFPSYAHLNVSSRNIFITKDFRGKLADIAAPDNLVNGPVSEKEDIFAFGVVLLELISARENIEGKLVKDSVGFLGGAGNEGGCFEGLRSFMDPNLKDYHLAEALCLAVLAKACVADDPLHRPTMDDIMKVLAKTVSPRQPEK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0454 597 Gene3D Transferase(Phosphotransferase) domain 1 485 596 - -
Prci6g0454 597 ProSiteProfiles LysM domain profile. 180 224 IPR018392 -
Prci6g0454 597 ProSiteProfiles Protein kinase domain profile. 306 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0454 597 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 5 591 - -
Prci6g0454 597 Pfam Protein tyrosine and serine/threonine kinase 379 483 IPR001245 GO:0004672|GO:0006468
Prci6g0454 597 Gene3D Transferase(Phosphotransferase) domain 1 355 484 - -
Prci6g0454 597 SUPERFAMILY Protein kinase-like (PK-like) 332 586 IPR011009 -
Prci6g0454 597 Pfam LysM domain 65 102 IPR018392 -
Prci6g0454 597 Pfam LysM domain 188 224 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0454 Prci-Chr6 2945757 2948126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0454 10 594 Receptor kinase-like Gene Family AT2G23770 31.562 7.77e-73 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci6g0454 PK_Tyr_Ser-Thr 1.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0454 - - lja:Lj1g3v4047410.1 642.114