Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci6g0452 | ATGGCAAATTCTACAAGTTCTGATCGTAGGGATAAGGCTGATGAAAATAACAATGGAAGGTGTCTCAATGAGATGGGCAGAATCAACTCAGGCTCTTCTATGAAAGATGCCACTGGTCCTAGAAGGTCTATCAGAGAAACTTCATCAAAGAAGACGACTCCTAGTCCCTCAAGTACTCGAAAGTCTGAACGACTTGGAAAGAGTACACCACTAAATCCTCCTGTCAGAAGGAAGTCTGAAAGGGTTGAGAAACAGAAGATGCCAAATTCTTTGAGGAGATCTAAAAGAACTAAGAATCACTCTGATATAGCTTCTTCAGGTTCTAAGGGCTTTGACTCGTTAGCTCAAAAGCAGAAAAAGAAAAAAAAACACAAGAGTGTAAAAAAATTAACATTTGAAGCTGAAAAAGCTGAAAATGAAGAATGTGAAGGAGAAACTTCTCAGGTAAAGAGGAAGAGAATGAATGCTCGTGCTTACCGGGCCATGATAAAGAAAAAGCCAAAAATAGATTGTCCTGAGGAGACAAATGGTAAAGGTAATTTAATTCCAGGTGGTGGCAACAATGTTGAGGGCAAGATTGATGAACGCTTCAAAGGAAGTAATTTAGTTTGTAAAGAAGCTGCCAAGAATGAAATGCTACCATCTGATGATGCCAAGGAGTTAGCTAACCTTTCTGCTATTAAGGTTAGAGTTGAAATTGAAGCCACCTTTGCTGCAGAAATTTCTGAGAAAGGTGTTGACTGCTCGCCTTCAAACGATGTCTCTATAGAGATCCAATCAGATGATGGAAAAATATGTCTCATTTGCCAATGTGGTGGGCAGCTCTTATTTTGCGATGGAAAAGAATGTGATGGATGCTACCATTTTTCTTGTCTTGAACCTCCCATGGTGGATGCTCCCCTTGGAGTTTGGCATTGTAACCTCTGCTTGAAGAAGAAGATAGAGTTTGGTGTATATTCTGTGTCTGAGGGAGTAGAATCAATTTGGGATACCAGAGAAGTCAAGGTGTCTCATGCTGAGGGATTGACAACTGAGAAACATTTTCTCGTGAAGTATAAAGGCCTTGCTCATGTTCACAACCGTTGGGTCTCAGAAAGTCAGTTACTTCTTGAAGCTCCTCCGTTGTTGCTTGAGAAATTTAATCAGAAAGATCAGGCCCTAAAGTGGAAGCTAGAATGGAGCATACCTCATCGCTTGCTTCAGAAGAGAGCATTAATCTTTGCCAATGATGGTCATCCCAGGAGTGGCCAAGCTGTTGGCAATTCTCAATGTCATTATGAATGGCTTGTTAAATGGCATGGTCTTGGTTATGAAGATGCATCATGGGAGCTGGACAATGCTCCGTTTCTTCGTTCACTTGAAGGTCAGAGGCTAATTAAAGACTATGAAGATCGTCATCAGAGGGCAAAGAGAGTTCCTTTATCATCCAAAGCAGATAAGAAACTAGACCGCATAAGTTCTTTTAGCAAATTATCTCAGACACCTGGTGGATTTCCGCCTGGATTTGGTGTAAACAATTTGGATGCAGTTAACAAGCTACGTGAGCATTGGCATAAGGGTCAGAATGCTGTTATATTTGATGACCATGACAGAATGGTGAAAGTGGTTGCATTTATCTTATCTTTGGACTCTAATACTTGTCAACCTTTTCTCATTATCTCAACCTCAGCTGCTCTCCATTTATGGGAGGATGAGTTTTCTTGTTGGGCACCATCTCTCAATGTTATTATTTACGGTGGAAACAAAGAGATTCGTAGAAGTATTCGGAAACTAGAATTTTATGGGGAAGGAGGCTGTTTGCTTTTCCAAGTACTTATAGTACTTCCAGAGATCATCATCGAGGATCTAGAGGTTTTAGAAGGCATAGAATTTGAAGCAATCTTAGTTGATGAGTGCCAGTGCTCAAAGATCTCATCTTATTCGAAACAAATTAAAATGTTAAAGACAGATTTGTGGATTCTTCTTCTTAGTGGCCAACTAAAGGATAGTGTTGTAGAATATCACGATATCCTGGCACTTCTTCATCATCGGAATTACAATGAAAAGAATGATGATTTAATCTCCAATTCCAGTGATATTGGTCAACTGAAGGATAAACTATCAAGTTTTGTTGCATATAGATGCAAATCAGACTCCTTTAGGTTTGTTGAGTATTGGATTCCTGTAAATATATCCAATGTGCAACTTGAGCAGTATTGTGCTGCTTTACTTTCAAACTCTTCAATACTCCGTTCTCAATCGAAATCTCATGTTGTTGGGGCGCTTCATGATATTCTTGTTACTACCCGGAAGTGTTGTAATCACCCCTACCTTGTTGATGAATCCCTACAAAGTTTACTTATCAAAGATCTTCCACCAGCTGAGATCCTGGATGTTGGAATAAAAGCAAGTGCGAAGCTGCAACTTCTTGATTCCATGCTCATGGAATTGAAAAAACAAGGTTTGAGGGTGCTTATTCTTTTCCAGTTTTTAGGTGGTTCTGGGAAGGTTTCAATTGGAGATATTTTGGATGACTTAATACGTCAAAGATTTGGTCCAGATTCTTATGAAAGAATTGACAAAGGTGTTTTGAATTCTAAGAAGCAAAGTGCTCTGAAAATGTTTAACAACAAGGACCACGGGAGATTTGTATTTTTATTGGAGGCCAATGCTTGCCATCAAAGCATCAAATTGTCATCAGTTGATACCATTATCATATTTGATAGTGATTGGAACCCATTGAATGATATAAGATCCCTTCAGAAAATAACACTTGATTCACAGTTGGAACAGATTAAAATATTTCGGTTATATTCATCTTTCACTGTTGAAGAAAGAGCCCTAGTCCTTGCTAAGCAGGATAGACCACTTGATACCAAATTTGACATAAGTTGGAGTACCAGTCACACACTATTGATGTGGGGGGCATCGTCTTTATTTGATGATTTAAAAGCTTTTCATGATGGTAAAACTGATTTCTTAAGTGTGGATTCCTTATCTGGACAATTATCTTTAAAACATGCTCTACATGAATTTTCATTCGTACTTAAGCAAAATGGTGAAGATAATGATGCAAGGGACTGCTCCTTTTTATTGAAAGTCAAGCAAAATGGAGTAAAATACCACCCAAATTTTTCTTTGCTTGGTGAGTGGAAATTTAAATCACTGGATTTAGAGCCATGCCACTTGTTTTGGACAAAAGTTTTGGAGGGAAAAAATCCACGGTGGAAATACTCATGTGGTTCATCTCAAAGGAGCCGAAAAAGGGTTCAGCATTTTGATTCAGGAAATAGACCTGACCTTGAGAATGAAGAGGTAGTGAAAAAGCGTTCAAAACTGATAAATAATGCTGATCAGCCTTATTCAAAACATGAAGGTGAACAATTATCTGCCAGAAACAAGGAAGGAAATTCTGGAGAACCAATGGAAAGACCTCAAGGCAATGATGTTGAATTCTTGAAAGCAAGGAAGTCACGTAATGAGCAGAGGAGCTTACATCTTTCTCTGAAGTCAGAAATAGCTAAGCTTTGTGAAATCCTACATGTCCCAGATAATGTCAGGAGGATGGCTGATGAATTTCTTGAGTATGTCATGGGCAACCACCATGTGAATAGTACTCTTCCAAAGTCAATACTGGAGGCTTTTCAAATTTCTCTGTGTTGGACTGCAGCTGCTTTGGTAAAGCACAAGATTGACCATGAAGCTTCCCTCATGCTTGCAAAACAGAATTTAAAATTTGGTTGCAGGAAGGATGAGGCAAACTTAATTTATTCAATGTTGCGGTGTCTGAAGAATATATTTTTGCATCGAACAGGAAACTACAATGTCACTGGCTCTCCAAAAGCTTCTGGATCTGAATTATCTGGTAAGAATTATTCCTGTATGGGCTTGGCGCTAGAGGTTGAATTGGCTAAGAAAGATGTCTCAAAAAGCATCAAAGAAATTCAAAAGAAGTGCCAAAAGAAGTTGAGGAAGTTACTCCTTAAGCATCAAGAAGAAAAGAAGAAGTTGGACGCAACATATGAGGAAAAAAGGGCTGATCTTGAGAAAAAATACAAAATAGAATCAGCCGTTATTCGATCCTCTTCTCCCAATGATGTGATGAGATCAGAAAAGCTTAAGGCTTTAGATATTGAATATACTGGAAGAATTGAAGATTTGAAGCATCAGCATCAAATACATCTCAAAGATCTTGAGGATGACCTATTGAAAGCAAGGCAAACGTTACAAAATTGGCAGGCTACTTGGGTGGAAGATGTGAAGTCTTGGGCACAAGATGAATTGTTAAACACACTTCCTTTGAAAGAACGTGAGAATAGCATACTTGAGGACTAG | 4314 | 0.3876 | MANSTSSDRRDKADENNNGRCLNEMGRINSGSSMKDATGPRRSIRETSSKKTTPSPSSTRKSERLGKSTPLNPPVRRKSERVEKQKMPNSLRRSKRTKNHSDIASSGSKGFDSLAQKQKKKKKHKSVKKLTFEAEKAENEECEGETSQVKRKRMNARAYRAMIKKKPKIDCPEETNGKGNLIPGGGNNVEGKIDERFKGSNLVCKEAAKNEMLPSDDAKELANLSAIKVRVEIEATFAAEISEKGVDCSPSNDVSIEIQSDDGKICLICQCGGQLLFCDGKECDGCYHFSCLEPPMVDAPLGVWHCNLCLKKKIEFGVYSVSEGVESIWDTREVKVSHAEGLTTEKHFLVKYKGLAHVHNRWVSESQLLLEAPPLLLEKFNQKDQALKWKLEWSIPHRLLQKRALIFANDGHPRSGQAVGNSQCHYEWLVKWHGLGYEDASWELDNAPFLRSLEGQRLIKDYEDRHQRAKRVPLSSKADKKLDRISSFSKLSQTPGGFPPGFGVNNLDAVNKLREHWHKGQNAVIFDDHDRMVKVVAFILSLDSNTCQPFLIISTSAALHLWEDEFSCWAPSLNVIIYGGNKEIRRSIRKLEFYGEGGCLLFQVLIVLPEIIIEDLEVLEGIEFEAILVDECQCSKISSYSKQIKMLKTDLWILLLSGQLKDSVVEYHDILALLHHRNYNEKNDDLISNSSDIGQLKDKLSSFVAYRCKSDSFRFVEYWIPVNISNVQLEQYCAALLSNSSILRSQSKSHVVGALHDILVTTRKCCNHPYLVDESLQSLLIKDLPPAEILDVGIKASAKLQLLDSMLMELKKQGLRVLILFQFLGGSGKVSIGDILDDLIRQRFGPDSYERIDKGVLNSKKQSALKMFNNKDHGRFVFLLEANACHQSIKLSSVDTIIIFDSDWNPLNDIRSLQKITLDSQLEQIKIFRLYSSFTVEERALVLAKQDRPLDTKFDISWSTSHTLLMWGASSLFDDLKAFHDGKTDFLSVDSLSGQLSLKHALHEFSFVLKQNGEDNDARDCSFLLKVKQNGVKYHPNFSLLGEWKFKSLDLEPCHLFWTKVLEGKNPRWKYSCGSSQRSRKRVQHFDSGNRPDLENEEVVKKRSKLINNADQPYSKHEGEQLSARNKEGNSGEPMERPQGNDVEFLKARKSRNEQRSLHLSLKSEIAKLCEILHVPDNVRRMADEFLEYVMGNHHVNSTLPKSILEAFQISLCWTAAALVKHKIDHEASLMLAKQNLKFGCRKDEANLIYSMLRCLKNIFLHRTGNYNVTGSPKASGSELSGKNYSCMGLALEVELAKKDVSKSIKEIQKKCQKKLRKLLLKHQEEKKKLDATYEEKRADLEKKYKIESAVIRSSSPNDVMRSEKLKALDIEYTGRIEDLKHQHQIHLKDLEDDLLKARQTLQNWQATWVEDVKSWAQDELLNTLPLKERENSILED | 1437 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci6g0452 | 1437 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 199 | 317 | IPR013083 | - | |
Prci6g0452 | 1437 | Coils | Coil | 120 | 140 | - | - | |
Prci6g0452 | 1437 | CDD | SF2_C_SNF | 784 | 906 | - | - | |
Prci6g0452 | 1437 | ProSitePatterns | Zinc finger PHD-type signature. | 266 | 309 | IPR019786 | - | |
Prci6g0452 | 1437 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 545 | 681 | IPR027417 | - | |
Prci6g0452 | 1437 | Pfam | SNF2-related domain | 533 | 772 | IPR000330 | GO:0005524|GO:0140658 | |
Prci6g0452 | 1437 | Coils | Coil | 1313 | 1340 | - | - | |
Prci6g0452 | 1437 | PANTHER | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | 48 | 1370 | - | - | |
Prci6g0452 | 1437 | SUPERFAMILY | Chromo domain-like | 422 | 466 | IPR016197 | - | |
Prci6g0452 | 1437 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 802 | 965 | IPR001650 | - | |
Prci6g0452 | 1437 | SMART | PHD_3 | 265 | 310 | IPR001965 | - | |
Prci6g0452 | 1437 | MobiDBLite | consensus disorder prediction | 49 | 66 | - | - | |
Prci6g0452 | 1437 | Gene3D | - | 324 | 387 | - | - | |
Prci6g0452 | 1437 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 514 | 678 | IPR014001 | - | |
Prci6g0452 | 1437 | MobiDBLite | consensus disorder prediction | 1105 | 1142 | - | - | |
Prci6g0452 | 1437 | Gene3D | - | 507 | 714 | IPR038718 | - | |
Prci6g0452 | 1437 | SUPERFAMILY | Chromo domain-like | 282 | 386 | IPR016197 | - | |
Prci6g0452 | 1437 | Gene3D | - | 715 | 951 | IPR027417 | - | |
Prci6g0452 | 1437 | ProSiteProfiles | Chromo and chromo shadow domain profile. | 323 | 392 | IPR000953 | - | |
Prci6g0452 | 1437 | ProSiteProfiles | Zinc finger PHD-type profile. | 263 | 312 | IPR019787 | - | |
Prci6g0452 | 1437 | SUPERFAMILY | FYVE/PHD zinc finger | 253 | 313 | IPR011011 | - | |
Prci6g0452 | 1437 | Coils | Coil | 1381 | 1408 | - | - | |
Prci6g0452 | 1437 | Gene3D | - | 398 | 474 | - | - | |
Prci6g0452 | 1437 | MobiDBLite | consensus disorder prediction | 1 | 129 | - | - | |
Prci6g0452 | 1437 | MobiDBLite | consensus disorder prediction | 74 | 102 | - | - | |
Prci6g0452 | 1437 | MobiDBLite | consensus disorder prediction | 22 | 37 | - | - | |
Prci6g0452 | 1437 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 716 | 950 | IPR027417 | - | |
Prci6g0452 | 1437 | SMART | chromo_7 | 392 | 467 | IPR000953 | - | |
Prci6g0452 | 1437 | SMART | chromo_7 | 322 | 385 | IPR000953 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci6g0452 | Prci-Chr6 | 2907499 | 2937442 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SNF2 | Prci6g0452 | SNF2_N | 1.2e-09 | CL0023 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci6g0452 | K11643 | - | aprc:113854369 | 1359.36 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci6g0452 | 6 | 2907499 | 2937442 | Prci6g0452 | 6 | 2907499 | 2937442 | ECH |