Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0450 ATGTTGCGGCACTGCAGCTATCACGGCGTTGCTTTAATGGCGGAAAACGACAAGAGGAGGCAGGAGAATGAGGCCGATCCGTTGAAGTGGGGTGAAGCGGCGGAGTCGACGAGGGGGTGCCACGTGGAGGAAGTGAAGGGCATGGTGAAGGATTACAGGAGGAAGGTGGTGAGGGTGGGAGGGGAATCGCTGACGGTGGGGCAGGTGGCTGCGGTGGCCGAGGCGAAGGCGAAGGCGGAGCTGGAGGAGGGGAAGAGGGAGGGAGTGGAGGCGAGCAGCGCGTGGGTGATTGAGAGCGTAAAGAAAGGGATGGACAGTTATGGAGTGACGACGGGGTTCGGTGCGACGTCGCACCGGAGAACCGGCCGAGGGGTGGCGCTGCAAGCTGAGCTTATAAGGTTTCTGAATGCGGGAATATTTGGGAAGGGAGCAGAAGCTTGCCATACTTTGCCACGCAGTGCATCAAGAGCAGCGATGCTGGTCAGAATCAACACGCTCCTCCAAGGTTATTCTGGCATCAGATATAACATACTCGAGGCCATTGCAAAACTACTCAACCACAGCATCACTCCATGCTTGCCCTTGCGTGGTTCCATTTCAGCCTCTGGGGACTTGGTCCCATTTTCATACATTGCTGGACTTCTGACAGGAAGGCCTAATTCAAAGGCCATTGGCCCCAACGGTGAGTCCCTAAGTCCGTCGGAAGCCTTCCATCTAGCCGGTATCCATGAAGGCTTCTTCGAGTTGCAGCCAAAGGAGGGTCTTGCGCTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCTTCCATAGTTCTTTTTGAGGCTAACACTTTAACAGTCCTATCTGAAGTCATGTCTGCAATTTTCGCTGAAGTAATGCACGGCAAGCCGGAGTTTACAGACCATTTGACACACAGATTGAAACATCATCCTGGGCAGATCGAAGCAGCGGCAATAATGGAACACATCTTGGATGGAAGTGCTTATGTCAAAGCTGCGCAAAAGTTGCACGAGATTGATCCTTTCCAAAAGCCTAAGCAAGATAGGTATGCTCTTCGAACTTCCCCTCAGTGGCTAGGTCCTCAGATTGAAGTTATCAGGTCGTCAACAAAATCCATTGAGAGGGAGATCAACTCTGTGAATGATAACCCTTTGATTGATGTATCGAGGAACAAAGCTCTTCATGGTGGCAATTTCCAGGGCACCCCAGTTGGCGTTTCCATGGACAACACAAGATTGGCTTTGGCTGCCATTGGAAAGCTCCTTTTTGCTCAAATGTCTGAGCTGGTTAATGATTTCTACAACAATGGCTTGCCTTCAAATCTGTCCGGGGGACGTTGTCCGAGCTTAGACTACGGATTCAAGGGTGGTGAGATAGCAATGGCTTCATATTGTTCTGAACTTCAGTATCTAGCAAACCCAGTCACAAATCACGTCCAAAGTGCAGAACAGCACAATCAAGATGTGAACTCATTAGGACTAATCTCTGCCAGGAAGACAGCTGAAGCTGTTGAGATATTGAAGCTCATGACTTCAACCTACTTGATTGCTCTTTGTCAAGCCATAGATTTGAGGCATTTGGAGGAAAACTTAAAGAATACGGTCAAGAATACAGTGAGCCAAGCGGCTAAGAAGGTCCTAACCGTGGGTGCTAACGGAGAGCTTCGTCCTTCAAGATTTTGTGAGAGAGATTTGCTCAAGGTGGTTGATCGGGAGCATGTATTTGGATATGTTGATGACCCGTGTAATGCTGCTTACCCTCTGATGGAGAAACTAAGGCGAGTGCTTGTAGAACATGCATTGATGAATAATGTTGGCTTGGAAAGTGGATATGCTTCCATATTCCTCAAGATCGGTGCCTTTGAAGAGGAACTGAAGGCAGTGTTGCCCAATGAAGTTGAGTCTGCAAGAAATGCCTTTGAGAAGGGGATTTCAGCAATCCCTAACAAGATTATAGAGTGCAGGTCCTATCCACTTTACAAGTTCGTCAGGGAGGAGTTGGGGGCACAGTTTTTAACTGGAGAGAAAAGTCGGTCCCCAGGAGAAGATTTTGATAAAGTTTTCACTGCAATCAGTGAAGGGAAGTTGATTGATCCCATGTTTGAATGCTTAAAGGATTGGGATGGTGCACCTCTTCCACTATGTTAA 2148 0.4884 MLRHCSYHGVALMAENDKRRQENEADPLKWGEAAESTRGCHVEEVKGMVKDYRRKVVRVGGESLTVGQVAAVAEAKAKAELEEGKREGVEASSAWVIESVKKGMDSYGVTTGFGATSHRRTGRGVALQAELIRFLNAGIFGKGAEACHTLPRSASRAAMLVRINTLLQGYSGIRYNILEAIAKLLNHSITPCLPLRGSISASGDLVPFSYIAGLLTGRPNSKAIGPNGESLSPSEAFHLAGIHEGFFELQPKEGLALVNGTGVGAGLASIVLFEANTLTVLSEVMSAIFAEVMHGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGRCPSLDYGFKGGEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMTSTYLIALCQAIDLRHLEENLKNTVKNTVSQAAKKVLTVGANGELRPSRFCERDLLKVVDREHVFGYVDDPCNAAYPLMEKLRRVLVEHALMNNVGLESGYASIFLKIGAFEEELKAVLPNEVESARNAFEKGISAIPNKIIECRSYPLYKFVREELGAQFLTGEKSRSPGEDFDKVFTAISEGKLIDPMFECLKDWDGAPLPLC 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0450 715 NCBIfam phenylalanine ammonia-lyase 26 705 IPR005922 GO:0005737|GO:0006559|GO:0016841
Prci6g0450 715 Pfam Aromatic amino acid lyase 64 534 IPR001106 -
Prci6g0450 715 PANTHER HISTIDINE AMMONIA-LYASE 22 715 IPR001106 -
Prci6g0450 715 FunFam Phenylalanine ammonia-lyase 17 261 - -
Prci6g0450 715 Gene3D Fumarase/aspartase (Central domain) 263 709 - -
Prci6g0450 715 Gene3D - 17 261 IPR024083 -
Prci6g0450 715 CDD PAL-HAL 62 525 IPR001106 -
Prci6g0450 715 FunFam Phenylalanine ammonia-lyase 528 649 - -
Prci6g0450 715 Gene3D - 528 649 IPR023144 -
Prci6g0450 715 SUPERFAMILY L-aspartase-like 26 715 IPR008948 GO:0003824
Prci6g0450 715 FunFam Phenylalanine ammonia-lyase 262 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0450 Prci-Chr6 2899150 2902543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0450 23 715 Monolignol Biosynthesis Gene Families AT2G37040 76.691 0.0 1138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0450 K10775 - vvi:100241575 1115.91