Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0448 ATGAAGCCCCAGCTCGAAGTTGTTTTCTCTTTTGTAATTTGCTTGATCTTGCTTCGATCCTCACTTTGTGATCAACAATCTGATACTTCTGGCCATAGCAAGTGGGTATGTAGATGTTCTTTCCAAGGGAACCAGGACTCTATTGCGAACTGTTCTACATCCTGCGATTGCCGTTCAGATGCCAAAGAGAGTGGATCTAAATGGACATGCATATGTGATCCCAACGGGTTTCCTAAAGTGGCAGTAGATGGCCATAGTCCTCATTGCTTTACAGCCTGCAAGTGCACCTGGGGATCTCTCCCCATGTCACAAGATTCAAAGAAACATATATCCAGCAAGATTATAATAGTCATTCTATTAGTATGTGTTGCATGTACAACAGTTGCATTTCTTGCCTCGTTCACATGCTATGTCTTCTGGAAGGACCGATGTCCTATTCAATCGCCAATGATCTCATCAGATAAGGAAACAAGTTGCAATAGCACCACCAACTTAATTAGTAACGGGACTTCTTCGGTGCTAGAAACAAAAATTGCCATAAATTCGCCCGTTAATCATATTACAGGGTGCTTTAAAAAGGCCTCTTTCTTGTTTGGGAGCAGAACAGAAACTTTTCAAGGCAAAATTATTCAATTTTCATTTGCTGAATTGGAAAATGCAACTGAAAACTTTTCAGCTTCCAATCTTATTGGACTTGGTGGAAGTAGCTATGTATATCGTGGTCAGCTGAAAGATGGCAGTGATGTGGCAATTAAGCGACTAAAATCTCAAGGAGGGCCTGAAGCTGACTCTGTATTTTTGACAGAGATTGAACTATTATCTAGGCTCCATCATTGCCATCTTGTGCCTTTACTTGGATACTGTTCAGAACTAAAAGGCAAACATGTTGAAAGGTTACTAGTGTTTGAGTATATGGCCAATGGCAATTTGAGGGACTGTTTGGATGGAGTTTCTGGAGAAATTATGGGTTGGGCTACTCGGGTAACAATTGCAATAGGAACGGCAAGAGGCTTGGAATATCTCCATGAGGCTGCTGCTCCAAGAATTCTGCACAGAGATGTCAAATCGACTAACATTCTTCTGGATGAAAATTGGCAGGCAAAAATAACTGACCTTGGTTTGGCTAAAAACTTGAGAGTTGATGATCCCCCAAGCTGTTCCAATTCTCCAGCTAGAATGCAGGGGACGTTTGGCTATTTTGCACCTGAGTATGCAATTTTTGGAAGAGCGTCTTGCAAGTCTGATGTCTTTAGTTTTGGGGTGGTTCTTCTTGAGCTCATGAGTGGTCGGCAGCCTATCCATAAATCCACCAGCAAGGAAGAAAGCCTAGTCATATGGGCTACACCTCGCTTGCAAGATAGTAGGCGAGTAATAACAGAGTTGGCGGATCCACAGTTGAAGGGAAACTTCCCTGAAGAAGAGGTGCAGATAATGGCGTACTTAGCCAAGGAGTGTCTGCTGTTGGATCCTGATGCTAGGCCAACTATGAGTGAAGTTGTTCAAATCCTTTCAACTATATCACCCGATAAACCTAGGAGGAGAATAAACATTCCAGTGAGCCTTTTTCAGGATCCTCAGGATGCAGAAAATAAAATGCAAGCTCCATCTAGTAAGTCTTCGGATCAAAATTCATTGCCATTAGGTATTAACCAAAATCTTATTGTTGAGAACAAAAAGGAAGGAGCAGAAACAGTTTCAGCTTCTATGGAGAGAGTGATCCTCTTGACTTCTAAAATAGAGGGTTGGCATGGATCAGATGATGAAACGGTAGACCTTACTGAGCCTCGGTTTGAATCATTCTGCCTGACAAACAGCAATTCTCTTTGA 1827 0.4215 MKPQLEVVFSFVICLILLRSSLCDQQSDTSGHSKWVCRCSFQGNQDSIANCSTSCDCRSDAKESGSKWTCICDPNGFPKVAVDGHSPHCFTACKCTWGSLPMSQDSKKHISSKIIIVILLVCVACTTVAFLASFTCYVFWKDRCPIQSPMISSDKETSCNSTTNLISNGTSSVLETKIAINSPVNHITGCFKKASFLFGSRTETFQGKIIQFSFAELENATENFSASNLIGLGGSSYVYRGQLKDGSDVAIKRLKSQGGPEADSVFLTEIELLSRLHHCHLVPLLGYCSELKGKHVERLLVFEYMANGNLRDCLDGVSGEIMGWATRVTIAIGTARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGLAKNLRVDDPPSCSNSPARMQGTFGYFAPEYAIFGRASCKSDVFSFGVVLLELMSGRQPIHKSTSKEESLVIWATPRLQDSRRVITELADPQLKGNFPEEEVQIMAYLAKECLLLDPDARPTMSEVVQILSTISPDKPRRRINIPVSLFQDPQDAENKMQAPSSKSSDQNSLPLGINQNLIVENKKEGAETVSASMERVILLTSKIEGWHGSDDETVDLTEPRFESFCLTNSNSL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0448 608 Gene3D Transferase(Phosphotransferase) domain 1 305 517 - -
Prci6g0448 608 FunFam receptor-like serine/threonine-protein kinase NCRK 198 304 - -
Prci6g0448 608 MobiDBLite consensus disorder prediction 521 549 - -
Prci6g0448 608 Pfam Protein kinase domain 226 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0448 608 CDD STKc_IRAK 230 503 - -
Prci6g0448 608 PANTHER OS01G0750732 PROTEIN 27 534 - -
Prci6g0448 608 SMART serkin_6 224 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0448 608 SUPERFAMILY Protein kinase-like (PK-like) 205 503 IPR011009 -
Prci6g0448 608 MobiDBLite consensus disorder prediction 526 549 - -
Prci6g0448 608 Gene3D Phosphorylase Kinase; domain 1 191 304 - -
Prci6g0448 608 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Prci6g0448 608 FunFam receptor-like serine/threonine-protein kinase NCRK 305 515 - -
Prci6g0448 608 ProSiteProfiles Protein kinase domain profile. 224 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0448 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0448 Prci-Chr6 2851423 2856568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0448 1 604 Receptor kinase-like Gene Family AT2G28250 52.998 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Prci6g0448 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0448 - - gmx:100817870 897.886