Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0440 ATGGGCTTTGGAAATACAAGATCCGTAAGATTTCAAGATGATCTTGAACAAGCAAAAATCCCCGTGACTAACAGTGACAACGGGATCAAAGTAAAATACAACATTGATGGAGTACAAATACCCGAGCCTAGCAGCACCAAAATGGCTCAGAAGAATGAAACAGGGAAGACTGGGAAGTTCTTGAGAGGCAGAGTATTGTCAAGGGTATTCTCAGAGGATTACGAAAGAGTGAAAAGAAAAATACTAGATCCTCGAGGACAAACCATTCACCGATGGAACAAGATTTTCTTGGTGGCATGTTTAATATCTTTGTTTGTGGACCCCCTCTTCTTTTACTTGCCAGTAGTTCAAGATGAAGTGTGCATTGAGATTGGAATAACACCTGAAGTTATCCTCACAGTCATTAGAACAGTTGCAGATTTCTTTTACATGTTTCAGATTTTCATGAAGTTTCGTACAGCTTATGTTGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATCGATTCTTCTAAGATTGCATTTAGGTACTTCAGGAAGAGTTTCTGGTTAGACTTTGTTGCTGCTCTGCCTCTTCCACAGGTGTTAATTTGGCTTGTCATCCCCTTCCTCAGGGGTTCTACCATGGCAAATACAAAAAATGTTCTTCGATTCATCATCATCTTTCAGTATCTCCCTAGGCTGTTTCTCATTTTCCCACTTTCATCAATTGTAAAGGCTACTGGAGTTGTAACGGAAACAGCATGGGCTGGTGCTGCTTACAACCTGATGCTTTACATGTTGGCAAGCCATGGTTTAGGTGCTATGTGGTATCTTCTATCAATTGAGCGACAGGAAGCATGCTGGAGAAGTGTTTGTGATCAGGAGAAGTCATATTGTCAATATGGATATTTTGACTGCCACAGGGTCAACGAAGCCAGTAGGGTCGCCTGGTTTATTGCAAGTAATGTCACAAATTTATGCTCACCTGATGTCAACTTTTATCCATTTGGCATATATGGTGATGCGGTGACTTCTGAAGTCACAAGCTCACCATTCTTTAACAAGTATTTCTACTGTCTTTGGTGGGGCTTAAGAAATCTGAGTTCTTTAGGACAGGATCTTCTCACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTGTAGTTGCAACCCTTGGATTGGTTCTTTTTGCCTTGCTTATTGGTAATATGCAGACATACCTTCAATCAACAACCGTCCGCTTAGAAGAGTGGAGGGTCAAAAGAACTGATACAGAACAATGGATGCATCACAGACAGCTACCTTCGGAACTAAGACTAGCCGTAAGGAAGTATGATCAATATAAATGGTTGGCCACCCGAGGAGTTGATGAAGAGGCTCTTCTCAAAGGACTTCCAGTGGATCTTCGAAGAGACATCAAGCGCCACCTTTGCCTCGACCTTGTCCGAGGAGTCCCATTATTTGACCAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTGAAACCTGCATTGTGCACCGAGGGCACCTATCTTGTTCGCGAGGGCGATCCAGTGGATGAAATGCTCTTCATAATAAGAGGCCATCTGGATTCCTACACCACCAACGGCGGCCGAACCGGGTTCTTCAATTCATGCCGGATTGGTCCGGGCGATTTCTGCGGCGAGGAAATACTGACATGGGCATTGGACCCTCGACCGAGTGTCATACTTCCATCTTCCACTAGAACAGTGAAGGCCATCTCCGAAGTAGAAGCTTTTGCGCTTATGTCAGAGGACCTCAAGTTTGTAGCGTCTCAGTTCAGAAGGCTGCACAGTAAACAGCTGAGGCACAAGTTCAAGTTTTACTCGCACCAGTGGCGAACATGGGCTGCATGTTTCGTCCAAGCTGCATGGAGGAGGTATAAGAAGAGGAAGGAACTTGCTGGACTGAGGGCTAAAATGAACCAAACTGATGATGCTGAGCCTGAAACACCAAATTCTGGCTCGTCAGGCTTAGTCGCATATGGATCGAGTAAGGGTAGGAGCACCGGAAAAGGGGTTAATATGTGTTCTGAGGCAGCTTCTGGGGTTGTAAGCTCTCTGCAGAAGCCTGAAGAACCAGACTTTACTGTTGATGAGTAA 2118 0.4438 MGFGNTRSVRFQDDLEQAKIPVTNSDNGIKVKYNIDGVQIPEPSSTKMAQKNETGKTGKFLRGRVLSRVFSEDYERVKRKILDPRGQTIHRWNKIFLVACLISLFVDPLFFYLPVVQDEVCIEIGITPEVILTVIRTVADFFYMFQIFMKFRTAYVAPSSRVFGRGELVIDSSKIAFRYFRKSFWLDFVAALPLPQVLIWLVIPFLRGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSXIVKATGVVTETAWAGAAYNLMLYMLASHGLGAMWYLLSIERQEACWRSVCDQEKSYCQYGYFDCHRVNEASRVAWFIASNVTNLCSPDVNFYPFGIYGDAVTSEVTSSPFFNKYFYCLWWGLRNLSSLGQDLLTSTFVGEIMFAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPSELRLAVRKYDQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVDEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEEILTWALDPRPSVILPSSTRTVKAISEVEAFALMSEDLKFVASQFRRLHSKQLRHKFKFYSHQWRTWAACFVQAAWRRYKKRKELAGLRAKMNQTDDAEPETPNSGSSGLVAYGSSKGRSTGKGVNMCSEAASGVVSSLQKPEEPDFTVDE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0440 706 CDD CAP_ED 484 615 IPR000595 -
Prci6g0440 706 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci6g0440 706 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci6g0440 706 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci6g0440 706 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci6g0440 706 PRINTS EAG/ELK/ERG potassium channel family signature 379 390 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci6g0440 706 PRINTS EAG/ELK/ERG potassium channel family signature 147 156 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci6g0440 706 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 73 702 - -
Prci6g0440 706 SUPERFAMILY cAMP-binding domain-like 414 609 IPR018490 -
Prci6g0440 706 Pfam Cyclic nucleotide-binding domain 507 594 IPR000595 -
Prci6g0440 706 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Prci6g0440 706 MobiDBLite consensus disorder prediction 652 681 - -
Prci6g0440 706 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Prci6g0440 706 ProSiteProfiles IQ motif profile. 620 649 IPR000048 GO:0005515
Prci6g0440 706 SMART cnmp_10 484 615 IPR000595 -
Prci6g0440 706 FunFam Cyclic nucleotide-gated ion channel 1 411 475 - -
Prci6g0440 706 Gene3D Helix hairpin bin 411 475 - -
Prci6g0440 706 ProSiteProfiles cAMP/cGMP binding motif profile. 484 581 IPR000595 -
Prci6g0440 706 Gene3D - 93 408 - -
Prci6g0440 706 Gene3D Jelly Rolls 482 602 IPR014710 -
Prci6g0440 706 MobiDBLite consensus disorder prediction 645 681 - -
Prci6g0440 706 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0440 Prci-Chr6 2834930 2840632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0440 58 705 Ion Channels AT2G28260 75.463 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0440 K05391 - gmx:100811847 1160.59