Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0422 ATGAAGGATTCTTGGTTTTTTGACAAGAATTTTAATGGTTTGTCGGATGAAATTTTTGATGATGTCATCAAATTTTTTGATTTCCCGCTGGAAGATGTGGAAGCTAATGCCATGGAAGAAGATTGGGATGCCCAATTCAAATGCCTTGAAGAGCCATATTTTGATGCTTTCTCCATCTCGCCTTCTGGGCTTTGTGATAAAACTCGAAAAGGCAATCCTAAACTTGAGAGGATCTCTACTACTCGTGCTGAGATTTCCCCAATAGAAGTGCCAGAGACGACGAAACTGGCATATATCAAAAGCGTTCCCAATCCAAAAGTCTCTTCCAACGGCAAAGATATCTTCCAATTCCAGATCTACAGTCCAGTCTCTGTTTTTGAAAGCAGCAGTTCTTCATCAGGCGAGAATGCCTCCGATCAGCCTGTCATCCGAAAGCGAGCTCGCAGCAAACGACGACCTCTCTCAATCCTCAGTCCTCTATTCTCAGTTCCTTTCATCTCTTCTTCACGAGCATTCCAAAAACCTCGGAGGGCAGCTGCTGCTGAGTCGGATTTTGAAACATTCCTCAGTTGGAAACCATCTCACGGTCCGAAAGAGAAGCAGAGGAAAAAGGATGTCTCTGGTCTTACTAATATGAAGAGATCGTCATCTCATGAGTCGATCATCTCCCGAAAATGCATGCATTGTCAGGTCACGAAGACCCCGCAATGGAGGGAGGGACCTATGGGCCCAAAAACGCTATGCAATGCATGTGGGGTTCGGTACCGGTCCGGCCGCCTGTATCCTGAATACCGGCCGGCCGCGAGTCCAACTTTCGTAGCATCATTGCACTCCAACTGTCACAAAAAGGTCTTAGAGTTGAGAAACAGAGCTATCAGTGAAGCTGATGAGAGAGGTCCAATATTGCCTTTGTCATCAAAACCTCCAAGAAATTCGCTAGGATAA 945 0.4571 MKDSWFFDKNFNGLSDEIFDDVIKFFDFPLEDVEANAMEEDWDAQFKCLEEPYFDAFSISPSGLCDKTRKGNPKLERISTTRAEISPIEVPETTKLAYIKSVPNPKVSSNGKDIFQFQIYSPVSVFESSSSSSGENASDQPVIRKRARSKRRPLSILSPLFSVPFISSSRAFQKPRRAAAAESDFETFLSWKPSHGPKEKQRKKDVSGLTNMKRSSSHESIISRKCMHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLYPEYRPAASPTFVASLHSNCHKKVLELRNRAISEADERGPILPLSSKPPRNSLG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0422 314 MobiDBLite consensus disorder prediction 127 149 - -
Prci6g0422 314 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 222 281 - -
Prci6g0422 314 SMART GATA_3 220 270 IPR000679 GO:0006355|GO:0043565
Prci6g0422 314 FunFam GATA transcription factor 215 299 - -
Prci6g0422 314 MobiDBLite consensus disorder prediction 191 214 - -
Prci6g0422 314 ProSiteProfiles GATA-type zinc finger domain profile. 220 256 IPR000679 GO:0006355|GO:0043565
Prci6g0422 314 Pfam GATA zinc finger 226 259 IPR000679 GO:0006355|GO:0043565
Prci6g0422 314 CDD ZnF_GATA 225 272 IPR000679 GO:0006355|GO:0043565
Prci6g0422 314 MobiDBLite consensus disorder prediction 193 209 - -
Prci6g0422 314 Gene3D - 220 270 IPR013088 GO:0006355|GO:0008270
Prci6g0422 314 PANTHER GATA TRANSCRIPTION FACTOR 39 299 - -
Prci6g0422 314 ProSitePatterns GATA-type zinc finger domain. 226 251 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0422 Prci-Chr6 2758022 2761777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0422 8 296 C2C2-Gata Transcription Factor Family AT1G08010 38.538 4.95e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci6g0422 GATA 5e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0422 - - pcin:129312873 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0422 6 2758022 2761777 Prci6g0422 6 2758022 2761777 ECH