Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0394 ATGGCTTCTTCCAAAAATTCGAAGACCGAACAGAAAAGCGAAGCAGCAAGCAGCTTCAAAACAGCGAAGAAAGCCGCTAAGCCCAGAAAGGAGAAGAACTTGAACAAGAAAAACAAGAGCAATAAGAACAAACTTGGCAATTCTAATGTGAAAGAGGAAGACAGAGAGATCGTTGTTCCTTCTTCCAGCACCGGGTCCCGTGAAAAAGCCCAAGAAGAAGGGCGTCAGGATGACAAGACTGAGATCACAAATGGGCGAACCAGTGCAACGAAACCCAAAAAAGACAGAGTCAAAGGAATCAAGCACGACGACGAAGATGAAGCTGAAGGTAAAGGAGACGCTAAAGGCAACGTGTTTCCCATGAATCGTATTCGAACGATTATTAGGGGCCAAGATCTTGATTTGCGTATTTCCCAGGAAGCTATATTTGTCATCAACAGAGCCACAGAGATGTTACTTGAACAATTTACGCGAGACACTTATGCTACCTGTGTTCGGGATCGAAAGAAATCTCTTGCTTATAAACACCTATCATCTGTTGTTAGTAAGCAGAGCAGATACGACTTTCTATCTGATTTTGTTCCAGAGAAAATAAAAGCGGAGGATGCATTAAGGGAGAGGAATTCTGGTGTGAATGTTGGTTAG 645 0.431 MASSKNSKTEQKSEAASSFKTAKKAAKPRKEKNLNKKNKSNKNKLGNSNVKEEDREIVVPSSSTGSREKAQEEGRQDDKTEITNGRTSATKPKKDRVKGIKHDDEDEAEGKGDAKGNVFPMNRIRTIIRGQDLDLRISQEAIFVINRATEMLLEQFTRDTYATCVRDRKKSLAYKHLSSVVSKQSRYDFLSDFVPEKIKAEDALRERNSGVNVG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0394 214 MobiDBLite consensus disorder prediction 68 113 - -
Prci6g0394 214 MobiDBLite consensus disorder prediction 23 39 - -
Prci6g0394 214 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 119 181 IPR003958 -
Prci6g0394 214 SUPERFAMILY Histone-fold 105 197 IPR009072 GO:0046982
Prci6g0394 214 MobiDBLite consensus disorder prediction 1 114 - -
Prci6g0394 214 MobiDBLite consensus disorder prediction 1 18 - -
Prci6g0394 214 Gene3D Histone, subunit A 66 196 IPR009072 GO:0046982
Prci6g0394 214 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 77 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0394 Prci-Chr6 2518086 2520593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0394 101 180 CCAAT-HAP5 Transcription Factor Family AT1G07980 45.000 2.59e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci6g0394 CBFD_NFYB_HMF 1.3e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0394 - K03506 adu:107476944 176.407