Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0385 ATGATGGAGGAAGATCAAGTGCCCTTTAATGACACATTTCCACCTGGTTTTAGGTTCCATCCATCTGATGAGGAACTCATAGTTCATTACTTGAAGAAGAAGATCAACTCACATCCACTTCCAGCACCTATTGTTGCTGAAATTGATCTTTATAAGTTCAACCCATGGGAGCTACCAGAGAAAGCCTTGTTTGGGGAGGATGAGTGGTACTTCTTCAGCCCGAGAGATAGGAAATACCCAAATGGGTTAAGGCCAAACAGGGCAGCAGCTTCTGGGTATTGGAAGGCCACAGGAACTGACAAGCCAGTTTTCACTCGCTGTGGATCGAAGTTCATGGGAGTGAAGAAAGCTTTGGCTTTTTACTCAGGTCGTCCACCTAAAGGGACTAAGACAGATTGGATCATGAGCGAATATAGATTGCTCGACACAACTAGAAAACCTTCTAGGTTCAAAGGTTCCATGCGTTTGGATGATTGGGTGCTATGTCGGGTTCGATATAAAGGCTCTTCATCAAATCATAGCGGACAGTATCAGGAGAATCAGAGCGGGTCAAAATTGAACCTACCAACAATCACAGATTATCAAATCTTAGCTTTTGTTCTTGCCGATGAACCTAAGCTTCCCTCTGACAACACGACTGGTATGAACTTTAGAAGCAGCAAAGGCAACACCTACACTTCATTGAGTCCTCAGATGACAATCCCTTCTTTGGACTTCAATTGCTTTGACTTGCTGAAAATAACGTCTAATGAGGATAGTCAACGTGGAAATCTCATTTCTTTTAACAGCAAGCCAAACCATGAGCACAGGATTGATAATCTTCCAGATAGAAACTGCTATAGCCAAAGTCAGTGTAATGAGGGAACTCTTGGCCAGAGAATACTGCATCCCATCATCAATTTTCAAGAACTGAAAGGATTACCCTTTACAGGAAGGTTCACGCAATAA 948 0.4283 MMEEDQVPFNDTFPPGFRFHPSDEELIVHYLKKKINSHPLPAPIVAEIDLYKFNPWELPEKALFGEDEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPVFTRCGSKFMGVKKALAFYSGRPPKGTKTDWIMSEYRLLDTTRKPSRFKGSMRLDDWVLCRVRYKGSSSNHSGQYQENQSGSKLNLPTITDYQILAFVLADEPKLPSDNTTGMNFRSSKGNTYTSLSPQMTIPSLDFNCFDLLKITSNEDSQRGNLISFNSKPNHEHRIDNLPDRNCYSQSQCNEGTLGQRILHPIINFQELKGLPFTGRFTQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0385 315 PANTHER NAC TRANSCRIPTION FACTOR 56 13 216 - -
Prci6g0385 315 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Prci6g0385 315 FunFam NAC domain-containing protein 72-like 22 172 - -
Prci6g0385 315 SUPERFAMILY NAC domain 12 167 IPR036093 GO:0003677|GO:0006355
Prci6g0385 315 ProSiteProfiles NAC domain profile. 13 167 IPR003441 GO:0003677|GO:0006355
Prci6g0385 315 Gene3D NAC domain 22 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0385 Prci-Chr6 2466540 2467723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0385 8 170 NAC Transcription Factor Family AT1G61110 70.760 7.21e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci6g0385 NAM 9.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0385 - - gmx:100777776 375.555