Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0384 ATGAGCGTCATAGATATTATCTTCCGAGTCGATTCGATATGCCAGAAATACGACAAATATGACATCGACAAGCAGCGGGAGCTCAATGCCTACGGTGATGATGCCTTTGCTCGCCTCTACGCTGCCTTCGAGAATAACATCCATGCCGCCCTCAATAAATCGGAGATTGCTTCTAATGAGAAGAACAGGGCAGCTGCAGCAGCATTGAATGCGGAAGTTCGTCGAACTAAAGCTGGACTAATGGAAGAAGTCCCCAAGCTTCGGAAACTAGCGCAGAAGAAGGTAAAGGGCCTTACAAGTGAAGAAATGGCCATTCGGAATGATATGGTTCTGGCATTGCCGGAAAGGATCCAAGCAATACCAGATGGTATCGCTGCTGCAGCAAATCAAGCTGGAGGAGGGGTTTCTCCCTCATCTCATCAAAATATTAAGTTTGATTCATCAGAAGGATACAACGAAGACCTATATTACCAACAAACTGAAGAATCAAATCAGTTTAGATCAGAGTTTGAGATGCGAAAAATGAAACAGGATGAAGGGCTTGATATCATATCAGAAGGATTGGATACGTTGAAGAATTTGGCCCTTGATATGAATGAGGAATTGGATCGGCAAGTTCCACTAATGGATGAAATTGGTACAAAGGTTGATAAGGCCACATCCGAGCTCAGAAATAATAACGTGAGGCTGAAGAAAACTCTCAACCAGGTGAGGTCTAGTCGAAATTTTTGCATTGACATCATTCTGCTGTGTGTTCTCCTTGGCATTGTTTCCTACATATACAATGTACTGAGGCAGTGA 801 0.4345 MSVIDIIFRVDSICQKYDKYDIDKQRELNAYGDDAFARLYAAFENNIHAALNKSEIASNEKNRAAAAALNAEVRRTKAGLMEEVPKLRKLAQKKVKGLTSEEMAIRNDMVLALPERIQAIPDGIAAAANQAGGGVSPSSHQNIKFDSSEGYNEDLYYQQTEESNQFRSEFEMRKMKQDEGLDIISEGLDTLKNLALDMNEELDRQVPLMDEIGTKVDKATSELRNNNVRLKKTLNQVRSSRNFCIDIILLCVLLGIVSYIYNVLRQ 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0384 266 Pfam SNARE domain 208 258 IPR000727 -
Prci6g0384 266 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Prci6g0384 266 SMART tSNARE_6 166 233 IPR000727 -
Prci6g0384 266 CDD SNARE_Qc 176 232 - -
Prci6g0384 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Prci6g0384 266 FunFam Putative syntaxin-71-like 171 232 - -
Prci6g0384 266 PANTHER SYNTAXIN 43 252 IPR045242 -
Prci6g0384 266 SUPERFAMILY SNARE fusion complex 164 232 - -
Prci6g0384 266 Gene3D - 171 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0384 Prci-Chr6 2462956 2465904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0384 1 265 SNARE and Associated Proteins AT3G09740 67.416 6.36e-134 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0384 K08506 - gmx:100777251 380.948