Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0376 ATGGAGTCCAGTGATCCGATCCCAAACATTCCAAGTCCTTCTTCTTCCGTACCTCTCTCTAACTCTCCTTCCCCCTCGTCTTCACCTCCACAAGCGGTCGTAAGCCCTTGTGCCGCCTGTAAGATTTTAAGGCGTAGATGTGCCGAGAAATGCGTTCTCGCTCCCTATTTCCCTCCTTCTGAACCTGCCAAGTTCACCATTGCTCACAGAGTCTTCGGCGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCGCAGAGAGCTGATGCAGTGAGCAGCATGGTGTACGAGGCGAGTGCAAGAATAAGAGACCCAGTGTACGGGAGTGCAGGTGCGATTTGCCAGCTTCAGAAGCAAGTGAACGAGCTTCAAGCTCAATTGGCGAAGGCCCAAGCGGAACTTGTGAACATGCAAATGCAACAAGCCAATCTGGTGGCTATCCTCTGCATGGAAATGGCTCAGACTACTCAGACTCAAACTCAAGCGGCGTCTCCTACTTTAACTCCTCACGAATATTCTTCGCCGCCATCATCGTCATTTGAAGATACGAACTTCATTACTTCAAGCAACCTCAACTTCTTCGCGGAAAGCACTGGCCTTAACGCTTTGTGGGAGCAGCCACTCTGGACATGA 639 0.507 MESSDPIPNIPSPSSSVPLSNSPSPSSSPPQAVVSPCAACKILRRRCAEKCVLAPYFPPSEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQMQQANLVAILCMEMAQTTQTQTQAASPTLTPHEYSSPPSSSFEDTNFITSSNLNFFAESTGLNALWEQPLWT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0376 212 MobiDBLite consensus disorder prediction 162 182 - -
Prci6g0376 212 Pfam Lateral organ boundaries (LOB) domain 36 133 IPR004883 -
Prci6g0376 212 Coils Coil 115 142 - -
Prci6g0376 212 ProSiteProfiles LOB domain profile. 35 136 IPR004883 -
Prci6g0376 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 173 - -
Prci6g0376 212 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0376 Prci-Chr6 2329863 2331539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0376 31 212 AS2 family AT1G07900 61.413 2.71e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci6g0376 LOB 4.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0376 - - gmx:100789504 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2559 7 37953645 37954800 Prci6g0376 6 2329863 2331539 CCT
Prci6g0376 6 2329863 2331539 Prci6g0376 6 2329863 2331539 ECH