Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0366 ATGCCTAGCCAGTCCTTGGAGAATATGTTGGCTTGTCCAAAGGCACAGAATCAAGAGAGAAAGCCAAGACCTCAGCCAGAACAGGCCCTGAAGTGTCCAAGATGCGACTCTACCAACACCAAATTCTGTTACTACAACAATTACAGTCTCTCCCAGCCAAGATATTTCTGCAAGTCTTGCAGGAGATATTGGACAAAAGGAGGAACTCTGAGGAATGTTCCAGTGGGCGGAGGCTGCAGGAAGAACAAAAGGTCCTCGTCATCTTCGTCGTCGTCATCAAAAAGAGCTCAGGATCAATCAGTCACACCCAATTCCAACCCACTCATCACCCCCCTCCCTCCATTATCATATGACCCCAATGAACTCACTCTTGCAATGGCTAGACTCCAAAAACAATCTTGCGGGCAATTGGGCTTTGGTGACCATGATTTTTCCGTTATGGGAAATTCCCTTGGAAACCTGTCTTCCACAAACATTGGATTTCTGGATGCACTTCGTAGTGGATTCCTTGAAACACAGGGTAATAGTCTCCAGGATCTGTACTACGGATATGGAAATGGGGACTCGGGAGAGGTGGATAATGGCAATAATAGTAATGCTTGTGGGATTGCTGGGGTTAGTGGAGAGATTATGCTTCCATTTGATCAAGAAGTGAGTAATGCCACTACTCAAGCAGTCACTGTCACTACCATGAAGCAGGAAATGTGCAATGGCAGAGAACAAGGTGACACCAAGGTTTTGTGGGGTCTTCCATGGCAGCTTAATGGAGACACGAATATGGGTGAAATTGATTCAGGAAGAGCAAATTGGAACAGTCTCACTTCGTCTTGGCACGGGCTTCTTAATAGTCCCCTAATGTAA 861 0.4611 MPSQSLENMLACPKAQNQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSSSSKRAQDQSVTPNSNPLITPLPPLSYDPNELTLAMARLQKQSCGQLGFGDHDFSVMGNSLGNLSSTNIGFLDALRSGFLETQGNSLQDLYYGYGNGDSGEVDNGNNSNACGIAGVSGEIMLPFDQEVSNATTQAVTVTTMKQEMCNGREQGDTKVLWGLPWQLNGDTNMGEIDSGRANWNSLTSSWHGLLNSPLM 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0366 286 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Prci6g0366 286 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 186 IPR045174 GO:0003700|GO:0006355
Prci6g0366 286 MobiDBLite consensus disorder prediction 1 31 - -
Prci6g0366 286 MobiDBLite consensus disorder prediction 81 106 - -
Prci6g0366 286 MobiDBLite consensus disorder prediction 75 114 - -
Prci6g0366 286 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Prci6g0366 286 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0366 Prci-Chr6 2292584 2294627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0366 28 286 C2C2-Dof Transcription Factor Family AT2G28510 43.165 3.83e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci6g0366 zf-Dof 5.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0366 - - gmx:100799737 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2563 7 37973007 37975630 Prci6g0366 6 2292584 2294627 CCT