Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0355 ATGTTAGATCTTAATCTCAATGCGGATTTAGCCGATTTGACTCATAACCATAACTCGGTCATGTTCCTTGACAAATTTCCTGAAGCTTCGGCGAATCAAATGGCGGAATCGGGGACCTCTAATTCATCTGTTGTCAATGCCGACGGGTCCAGTACTGGAGGAGGCGATGATGACTCTTGCTCTACACGCGCCGGCGACGTAGTCACCTTCAATTTCGATATCCTTAAGGTGGACAGCGGCAACGACGTCTCAACCAGGGAGCTGTTTCCAGTGAGTGGAACTAAAGGAGTGGATAGAGACTCAGGGATTTGGCAGGGGCAATCTTCATCGCCTTTTCCATCCAATGAGAGCTGGATGGAACTCTCATTCGATAGTCAAGGTGGCCGCGCACAGGCAAAGACGATTCAACTTCAGCAACAACCTCAGCCGCAGGTGAAGAAGAGCAGGAGAGGACCAAGGTCTCGGAGCTCCCAGTACAGAGGAGTCACCTTCTATAGGAGGACTGGCAGATGGGAATCACATATCTGGGATTGCGGCAAACAAGTCTATTTAGGCGGTTTTGACACTGCACATGCCGCTGCTAGAGCCTACGATCGAGCTGCTATTAAATTCAGGGGAGTTGATGCTGATATCAATTTCAACCTCAGTGATTATGAGGAGGATCTTAAACAGATGAAGAATCTCACCAAGGAGGAGTTTGTTCACATTCTTCGTCGCCAGAGTACCGGTTTCTCTAGGGGTAGCTCAAGATACCGAGGCGTAACACTACACAAATGTGGACGCTGGGAAGCTCGGATGGGGCAATTTCTTGGCAAAAAGGCTTACGATAGAGCAGCCATTAAGTGCAATGGAAGGGAGGCAGTAACTAACTTTGAGCCGAGTACTTATGAAGGGGAGTTGGACGCTGATGCAATCGATGAAGGTGTCAGTCACAATCTTGACCTCAATTTAGGCATAGCAACCCCAGGCAAAGGTCCCAATGAAAGCAGGGGCAATCTTGAGCTCCAGTCTTTTCCTTACAATATGCATGCCAGAACAAGTTCAACGGTGGCGACCAACACTGACTCAGTAAATGGCAATCGAGCTATGAAAAAGCTTCTAGTAACTGGAGATAGCCCTTCTGTATGGAATGGCATATTTCCAAATTTCTTTCCCAGTGAGGAAAGGGCAGAGATAATGAGGACGGGACTCCCCAGCTGGACGTGGCGAACATATGGCGAGCCAAGTGCTACCCCAGCTCCACAGTTCTCTGCTGCAGCATCATCAGGATTCTCCATTTCATCCACCTTTCCACCGTCCACTGCCATCTTCCCGGTGAAACCTATGAACTCACTCCCCCTCACTCTCTCTTTTTCCTCTTCATCCAGCACAGCTGCCCCCACCACATATCAGCATTATTGCCACATGAAGCACCCGCACTCTCCACCCTAA 1431 0.492 MLDLNLNADLADLTHNHNSVMFLDKFPEASANQMAESGTSNSSVVNADGSSTGGGDDDSCSTRAGDVVTFNFDILKVDSGNDVSTRELFPVSGTKGVDRDSGIWQGQSSSPFPSNESWMELSFDSQGGRAQAKTIQLQQQPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSRYRGVTLHKCGRWEARMGQFLGKKAYDRAAIKCNGREAVTNFEPSTYEGELDADAIDEGVSHNLDLNLGIATPGKGPNESRGNLELQSFPYNMHARTSSTVATNTDSVNGNRAMKKLLVTGDSPSVWNGIFPNFFPSEERAEIMRTGLPSWTWRTYGEPSATPAPQFSAAASSGFSISSTFPPSTAIFPVKPMNSLPLTLSFSSSSSTAAPTTYQHYCHMKHPHSPP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0355 476 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 125 346 - -
Prci6g0355 476 MobiDBLite consensus disorder prediction 101 117 - -
Prci6g0355 476 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Prci6g0355 476 MobiDBLite consensus disorder prediction 129 147 - -
Prci6g0355 476 Gene3D AP2/ERF domain 249 293 IPR036955 GO:0003700|GO:0006355
Prci6g0355 476 Gene3D AP2/ERF domain 157 215 IPR036955 GO:0003700|GO:0006355
Prci6g0355 476 FunFam AP2-like ethylene-responsive transcription factor 157 216 - -
Prci6g0355 476 MobiDBLite consensus disorder prediction 92 117 - -
Prci6g0355 476 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Prci6g0355 476 SMART rav1_2 250 298 IPR001471 GO:0003700|GO:0006355
Prci6g0355 476 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Prci6g0355 476 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Prci6g0355 476 MobiDBLite consensus disorder prediction 33 58 - -
Prci6g0355 476 MobiDBLite consensus disorder prediction 129 159 - -
Prci6g0355 476 CDD AP2 158 216 IPR001471 GO:0003700|GO:0006355
Prci6g0355 476 SUPERFAMILY DNA-binding domain 249 293 IPR016177 GO:0003677
Prci6g0355 476 MobiDBLite consensus disorder prediction 33 60 - -
Prci6g0355 476 CDD AP2 249 294 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0355 Prci-Chr6 2201775 2205777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0355 1 445 AP2-EREBP Transcription Factor Family AT5G60120 46.055 1.38e-100 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci6g0355 AP2 6.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0355 K09284 - gmx:100788303 566.229