Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0353 ATGTTAGATCTTAATCTCAATGCGGATTTAGCCGATTTGACTCATAACCATAACTCGGTCATGTTCCTTGACAAATTTCCTGAAGCTTCGGCGAATCAAATGGCGGAATCGGGGACCTCTAATTCATCTGTTGTCAATGCCGACGGGTCCAGTACTGGAGGAGGCGATGATGACTCTTGCTCTACACGCGCCGGCGACGTAGTCACCTTCAATTTCGATATCCTTAAGGTGGACAGCGGCAACGACGTCTCAACCAGGGAGCTGTTTCCAGTGAGTGGAACTAAAGGAGTGGATAGAGACTCAGGGATTTGGCAGGGGCAATCTTCATCGCCTTTTCCATCCAATGAGAGCTGGATGGAACTCTCATTCGATAGTCAAGGTGGCCGCGCACAGGCAAAGACGATTCAACTTCAGCAACAACCTCAGCCGCAGGTGAAGAAGAGCAGGAGAGGACCAAGGTCTCGGAGCTCCCAGTACAGAGGAGTCACCTTCTATAGGAGGACTGGCAGATGGGAATCACATATCTGGGATTGCGGCAAACAAGTCTATTTAGGCGGTTTTGACACTGCACATGCCGCTGCTAGAGCCTACGATCGAGCTGCTATTAAATTCAGGGGAGTTGATGCTGATATCAATTTCAACCTCAGTGATTATGAGGAGGATCTTAAACAGATGAAGAATCTCACCAAGGAGGAGTTTGTTCACATTCTTCGTCGCCAGAGTACCGGTTTCTCTAGGGGTAGCTCAAGATACCGAGGCGTAACACTACACAAATGTGGACGCTGGGAAGCTCGGATGGGGCAATTTCTTGGCAAAAAGTATATATACCTTGGGCTGTTCGACAGCGAAGTAGAAGCTGCAAGGGCTTACGATAGAGCAGCCATTAAGTGCAATGGAAGGGAGGCAGTAACTAACTTTGAGCCGAGTACTTATGAAGGGGAGTTGGACGCTGATGCAATCGATGAAGGTGTCAGTCACAATCTTGACCTCAATTTAGGCATAGCAACCCCAGGCAAAGGTCCCAATGAAAGCAGGGGCAATCTTGAGCTCCAGTCTTTTCCTTACAATATGCATGCCAGAACAAGTTCAACGGTGGCGACCAACACTGACTCAGTAAATGGCAATCGAGCTATGAAAAAGCTTCTAGTAACTGGAGATAGCCCTTCTGTATGGAATGGCATATTTCCAAATTTCTTTCCCAGTGAGAGGGTGGTGACAATGCGCATGAACAACATTTTGGCAGTAGATAGTGTGAGATCTTGTTTTACCTATTTGCGCAGGAAAGGGCAGAGATAA 1296 0.4769 MLDLNLNADLADLTHNHNSVMFLDKFPEASANQMAESGTSNSSVVNADGSSTGGGDDDSCSTRAGDVVTFNFDILKVDSGNDVSTRELFPVSGTKGVDRDSGIWQGQSSSPFPSNESWMELSFDSQGGRAQAKTIQLQQQPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSRYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDRAAIKCNGREAVTNFEPSTYEGELDADAIDEGVSHNLDLNLGIATPGKGPNESRGNLELQSFPYNMHARTSSTVATNTDSVNGNRAMKKLLVTGDSPSVWNGIFPNFFPSERVVTMRMNNILAVDSVRSCFTYLRRKGQR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0353 431 MobiDBLite consensus disorder prediction 101 147 - -
Prci6g0353 431 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Prci6g0353 431 Gene3D AP2/ERF domain 249 308 IPR036955 GO:0003700|GO:0006355
Prci6g0353 431 Gene3D AP2/ERF domain 157 215 IPR036955 GO:0003700|GO:0006355
Prci6g0353 431 Pfam AP2 domain 249 299 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 MobiDBLite consensus disorder prediction 92 159 - -
Prci6g0353 431 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 MobiDBLite consensus disorder prediction 33 58 - -
Prci6g0353 431 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 124 358 - -
Prci6g0353 431 FunFam AP2-like ethylene-responsive transcription factor 249 309 - -
Prci6g0353 431 SUPERFAMILY DNA-binding domain 249 308 IPR016177 GO:0003677
Prci6g0353 431 CDD AP2 158 216 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 FunFam AP2-like ethylene-responsive transcription factor 157 216 - -
Prci6g0353 431 CDD AP2 249 309 IPR001471 GO:0003700|GO:0006355
Prci6g0353 431 MobiDBLite consensus disorder prediction 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0353 Prci-Chr6 2201771 2205539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0353 73 333 AP2-EREBP Transcription Factor Family AT4G36920 65.314 1.48e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci6g0353 AP2 2.7e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0353 K09284 - qsa:O6P43_000276 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2573 7 38058505 38062994 Prci6g0353 6 2201771 2205539 CCT