Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0347 ATGGGTTGTTTTCTCTGCACTCGCGAACCAATCAACAAATCCTCCACTCACAACAATTCTAAATGCCCCGTACGCTGCGATAAGACGACCACCCATCGCCTTGTTGCAGATAATGTTAAAGCAGACTGGAACGTGAATATGAAGAAGGAAGCTATTTGTTCTAAGCCTAATGGCCTCTCTCCGGAGATGAAGGCCTTAAATTTAGAAGGCAAAATTCCGAAGGACGGAAAAGTGAATAATCTGAATCGTGCAAAATCTTTCACATTCCATGAGCTCGCAGAGGCGACAGGTCATTTCAGGTCAGATTGCTTGGTGGGAGAAGGAGGCTTCGGCAAAGTTTACAAGGGATACTTGAAGAGAACGAAGCAGGTGGCCGCTATAAAGCAACTGAACCCGGATGGGCATCAAGGGAAGAGGGAATTTGTGGTGGAAGTGTTGACACTGAGTACGGCAGACCACCCTAATCTCGTCAAACTCTTAGGATTCTGTGCCAAGGGACAACACAGATTGTTGGTTTATGAGTACATGCCTCTGGGATCCCTGGAGAATCATCTCTATGATCTTCCTGCCAGTAGAAAAGCTCTAGATTGGAACACAAGAATGAAAATAGCAGCAGGAACGGCAAGGGGTTTGGAATATCTGCATGACAAAATGAGGCCGCCAGTGATATACAGAGACCTGAAATGTTCCAACATATTGTTAGGAGAGGGATATCATCCCAAGTTGTCTGATTTTGGGTTGGCAAAAGTAGGCCCGAGTGGAGAAGACACCCATGTTTCAACTAGGGTCATGGGCACATATGGCTACTGCGCTCCAGATTACGCCATGACTGGTCAATTAACTTTTAAGTCCGACATTTACAGCTTTGGCGTTGTTCTTTTGGAGCTTATCACCGGCAAAAAAGCTTTTGACAACTCAAGACCTGCCAAACAGCAAAACCTGGTCTCTTGGGCAAGGCCAATGTTCAAAGACAGGAAAAGATTCACAGAAATGGTGGATCCATCGCTTGAAGGTCAATATCCAGTGAGAGGATTGTACCAAGCCCTGGCTATAGCAGCCATGTGCGTGCAAGAGAAGCCTCACATGAGACCTGTGATTGCTGACGTTGTCACTGCTCTCAACTTCCTCGCTTCCCAGAAATATGATCCTCACAGTAATCAAACTTCTTCGTACAAGCCCAGATCTAGGGCAAGCCGTGATCCACTCACAAATCATAATGATCATACTCTTCTTGATGTCAGTCTCTCTGAGTCTGACAGATCTGGGAGCGAAGAAAATAATTCTGACTCGGACAGTCGATCTGGCACCCAACAAAACAATTCTGAGAATGAAGAAAATCATTCTGACTCGGACAGATCTGGGAACAAACAAAATTAA 1377 0.4546 MGCFLCTREPINKSSTHNNSKCPVRCDKTTTHRLVADNVKADWNVNMKKEAICSKPNGLSPEMKALNLEGKIPKDGKVNNLNRAKSFTFHELAEATGHFRSDCLVGEGGFGKVYKGYLKRTKQVAAIKQLNPDGHQGKREFVVEVLTLSTADHPNLVKLLGFCAKGQHRLLVYEYMPLGSLENHLYDLPASRKALDWNTRMKIAAGTARGLEYLHDKMRPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGEDTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGKKAFDNSRPAKQQNLVSWARPMFKDRKRFTEMVDPSLEGQYPVRGLYQALAIAAMCVQEKPHMRPVIADVVTALNFLASQKYDPHSNQTSSYKPRSRASRDPLTNHNDHTLLDVSLSESDRSGSEENNSDSDSRSGTQQNNSENEENHSDSDRSGNKQN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0347 458 MobiDBLite consensus disorder prediction 398 427 - -
Prci6g0347 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Prci6g0347 458 Pfam Protein kinase domain 104 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0347 458 ProSiteProfiles Protein kinase domain profile. 99 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0347 458 MobiDBLite consensus disorder prediction 444 458 - -
Prci6g0347 458 Gene3D Phosphorylase Kinase; domain 1 71 175 - -
Prci6g0347 458 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Prci6g0347 458 FunFam serine/threonine-protein kinase PBS1-like 69 175 - -
Prci6g0347 458 SMART serkin_6 99 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0347 458 MobiDBLite consensus disorder prediction 381 397 - -
Prci6g0347 458 PANTHER OS07G0668900 PROTEIN 22 387 - -
Prci6g0347 458 FunFam Serine/threonine-protein kinase PBS1 176 391 - -
Prci6g0347 458 Gene3D Transferase(Phosphotransferase) domain 1 176 398 - -
Prci6g0347 458 MobiDBLite consensus disorder prediction 428 443 - -
Prci6g0347 458 SUPERFAMILY Protein kinase-like (PK-like) 84 392 IPR011009 -
Prci6g0347 458 CDD STKc_IRAK 105 374 - -
Prci6g0347 458 MobiDBLite consensus disorder prediction 381 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0347 Prci-Chr6 2094322 2097243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0347 74 378 Glycoside Hydrolase AT3G07070 60.984 2.78e-139 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci6g0347 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0347 - - gmx:100794680 567.385