Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0341 ATGTACCCACACTCTAAGGCTACATTCTCACGCTCCGCCACTTCCATCGATTATTTGCCGTCACCGACCGCAGCCACGGTGCCACTACTCTTTCCTTCACTTCCGTCAATGCATTCCGTCTCGCCTTCTCAGAACCACCTCATTCCAGACCGGCTCGCTGTCACTGAGTTCGACTCGCTGCTCAACTTGGAGATGAGCCGCAACAATAGTTGGAGCAGCGGTTGTAGCAGCTACGGCTGGCCCAGTTCGCTGGCGACCTACAGAACTCAACGGCCAAGCTTGATGCAGAGGAGCGTGAGCAGCCTTTCGCTTCAGAAGAATGACTATCGCCACCCTGTTTCTGCTCTATTTGCCGAGTTTCTTGACTCCGACGTCGGTCCGGTACGCAGAGTTTGCAGTACTGGTGATTTGCAGAGGATAAAGGGAATGGAAGAGAGGAATCAAGGGACAGAGAGTGCATTGGCAAGGGAAAGCAGCATGATCATAGAAGGGATGAGCAGGGCATGTCGTTACAGCCCAGAGGAAAAGAAGGTGAGGATTGAGAGATATCGAAGGAAGCGAAATCTGAGGAACTTCACCAAGAAAATCAAGTATGCTTGCAGGAAGACGCTGGCAGACAGCAGGCCACGCATCAGAGGAAGATTTGCGAGGAACGAAGAAACTGATAAGAACCCTACAGGTCCGCGGAGCCATGAAAATGGTGTTGGAGTAGAGGAAGAAGATAACGAAGAGGAGAATTGGGTTAATCTCTTTGATAATTTGGTCGCTGCAAATCTTGTTCAAGAGCCTCAAGATAGTTCTTCCTTTGGTCTCATGTTTTAG 822 0.5024 MYPHSKATFSRSATSIDYLPSPTAATVPLLFPSLPSMHSVSPSQNHLIPDRLAVTEFDSLLNLEMSRNNSWSSGCSSYGWPSSLATYRTQRPSLMQRSVSSLSLQKNDYRHPVSALFAEFLDSDVGPVRRVCSTGDLQRIKGMEERNQGTESALARESSMIIEGMSRACRYSPEEKKVRIERYRRKRNLRNFTKKIKYACRKTLADSRPRIRGRFARNEETDKNPTGPRSHENGVGVEEEDNEEENWVNLFDNLVAANLVQEPQDSSSFGLMF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0341 273 ProSiteProfiles CCT domain profile. 176 218 IPR010402 GO:0005515
Prci6g0341 273 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 56 232 IPR045281 GO:0009909
Prci6g0341 273 MobiDBLite consensus disorder prediction 210 242 - -
Prci6g0341 273 MobiDBLite consensus disorder prediction 210 227 - -
Prci6g0341 273 Pfam CCT motif 178 218 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0341 Prci-Chr6 2001987 2004997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0341 172 223 C2C2-CO-like Transcription Factor Family AT5G15850 48.077 1.77e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci6g0341 CCT 2.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0341 - - aprc:113859774 270.781