LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci6g0340	ATGATGGATCGTAGAACAATTGGCTTCTTTTTCTGTTGCTTTTCCATTTTGCCGTTGCTTTGCTTTTCTGCCACCTTCCTACCGCAAGACAATTACCTCATAGACTGTGGAGCAGCTTCTAATACTTTATTCGGTAGCCGCAATTTCGCGGCGGATGCGTTCTACAAGAATCTCCTTTCTACTCAACGTGATGTTCTCGCCAGTACCTCCTCAAAATCAATCTCTTCCTCTGCCGATTCACCTCTATATCAAACAGCAAGAATCTTCAGTGGACCGTCAAAGTATACGTTCTCGATCAGCCAAAAGGGTAGACATTGGATCCGTCTCTATTTCTTTCCATTTGTGTATCAGAACTTCGATATGAGTACAGCAAATTTTGCTGTCACAACCCAAAACAATATTCTTCTCAGTGATTTCACTGTGCAGAAGAATCCTGTTGTGAAGGAATATTCTGTGAACGTGACTTCAGACACCCTTGTAATCACCTTTACTCCTTCCAGCAATTCCATTGCATTCGTAAATGCAATTGAAGTTGTTTCAGTACCTGATGAACTCATTGCTGATGACGCTTCCACCATAAATGCACCGGGAAGTTTCTCTGGGTTGGTGACGCTGGCATTTGAGACAGTTTGGAGGATTAACATGGGTGGTCCAACTGTCTCCTCTGCAAATGACACCCTTCACCGGACCTGGGTACCGGATCAAAATTTTCTCGCCACTCCTGACCTTGCTACCGATGTTTCAAATATGGCTGCTGTTAAGTATGTAGACGGCGGGGCAACAGAGAACATTGCTCCACGTACAGTCTATGGTACTCTCACAGAGATGAACTCAAGCAGTGATCCTCGTAGTAATTTCAATGTGACCTGGCAGTTTGACGTAGATCCAGGATTTCAGTATCTTGTTCGACTTCACTTCTGTGACATAGTTAGCAATGGCCTCAACGAACTTTACTTCAATGTCTATGTCAACTCCTACATGGCGGAAAAAAATTTTGATCTCAGCACCTCTACTAACAATGTTTTGGGCGCTACACTTTACAAGGACTATATTACGGCCCCAACTGATAGCAAGAACATTCGTGTAAGTGTTGGCCCTTCTACTTTAAACAGTGATTACCCGAATGCCATTCTAAATGGGCTGGAGATCATGAAAATGAGTAATTCTAAGGGCAGTCTGAGTTTAGCAACAGCTGCGACTGGTACTGGTTCAAACTCAAAGACGAAAGTAGGCATTATAGCGGGTGTAGTAATAGGGACATTGTGTGTAGTGGTCCTTGCTGGATTTTTCTTTGTATTGTGCAGAAGAAAACGTTTGGCACGACAAGGCCTTTCAAAGACATGGGTTCCCTTATCCATCAATGATGGAGCTTCTCATACCATGGGAAGTAAATATTCCAATGGCACAACACTAAGCGCCGCTTCCAACTTAGGGTACCGCATCCCATTCGTGGCAGTTCAGGAGGCTACAAACAATTTTGATGAGAGCTGGGTTATTGGGATAGGTGGTTTTGGGAAAGTGTACAAGGGAGAACTGAATGATGGCACTAAAGTGGCAGTTAAGAGAGGGAATCCCCGGTCCCAGCAAGGGCTTGCGGAGTTCCGAACTGAAATTGAAATGCTATCTCAGTTCCGTCACCGCCATCTAGTGTCCTTGATAGGGTATTGTGATGAGAAAAATGAAATGATCTTGATCTATGAGTATATGGAACAGGGAACTCTCAAGAGTCATCTCTATGGTTCAGATCTCCCAAACTTAAGTTGGAAAGAAAGGCTGGAGATCTGCATTGGAGCAGCTAGAGGACTACACTACCTTCACACTGGCTATGCCAAAGCAGTTATACACCGAGATGTGAAGTCGGCAAATATCCTGCTTGATGAGAACCTTATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACAGGGCCTGAAATTGATCAGACACACGTGAGCACTGCAGTAAAAGGAAGTTTTGGATACCTCGATCCTGAGTATTTCCGTAGGCAACAATTAACAGAAAAATCAGATGTTTATTCATTTGGGGTAGTTTTGTTCGAGGTTCTTTGTGCAAGACCTGTAATTGACCCATCACTTCCTAGAGAAATGGTGAACTTGGCCGAATGGGCAATGAAATGGCAGAAAAAGGGGCAATTGGAGCAAATCATAGATCCTACCCTTGCAGGGAAGATCAGACCGGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGCGTGGATCGGCCTTCTATGGGGGATGTCTTGTGGAATTTGGAGTATGCCCTTCAGCTTCAAGAGGCAGTTGTTCAAGGTGATCCTGAAGAGAACAGTACCAATATGATTGGTGAACTCTCTCCACAGATAAACAATTTCAACCATGACGCAAGTGTTTCTGCTGCTCAGTTTGAAGCTTCAACCGTGGATGACCTGTCTGGTGTTTCAATGAGTAGGGTTTTCTCACAGCTGGTGAAGTCTGAGGGGAGGTGA	2502	0.442	MMDRRTIGFFFCCFSILPLLCFSATFLPQDNYLIDCGAASNTLFGSRNFAADAFYKNLLSTQRDVLASTSSKSISSSADSPLYQTARIFSGPSKYTFSISQKGRHWIRLYFFPFVYQNFDMSTANFAVTTQNNILLSDFTVQKNPVVKEYSVNVTSDTLVITFTPSSNSIAFVNAIEVVSVPDELIADDASTINAPGSFSGLVTLAFETVWRINMGGPTVSSANDTLHRTWVPDQNFLATPDLATDVSNMAAVKYVDGGATENIAPRTVYGTLTEMNSSSDPRSNFNVTWQFDVDPGFQYLVRLHFCDIVSNGLNELYFNVYVNSYMAEKNFDLSTSTNNVLGATLYKDYITAPTDSKNIRVSVGPSTLNSDYPNAILNGLEIMKMSNSKGSLSLATAATGTGSNSKTKVGIIAGVVIGTLCVVVLAGFFFVLCRRKRLARQGLSKTWVPLSINDGASHTMGSKYSNGTTLSAASNLGYRIPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEQGTLKSHLYGSDLPNLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHDASVSAAQFEASTVDDLSGVSMSRVFSQLVKSEGR	833

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci6g0340	833	CDD	STKc_IRAK	499	764	-	-
	Prci6g0340	833	SUPERFAMILY	Protein kinase-like (PK-like)	471	764	IPR011009	-
	Prci6g0340	833	Gene3D	Transferase(Phosphotransferase) domain 1	569	786	-	-
	Prci6g0340	833	Pfam	Malectin-like domain	34	386	IPR024788	-
	Prci6g0340	833	FunFam	Putative receptor-like protein kinase	31	182	-	-
	Prci6g0340	833	SMART	serkin_6	493	766	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci6g0340	833	FunFam	Receptor-like protein kinase FERONIA	569	784	-	-
	Prci6g0340	833	Gene3D	Phosphorylase Kinase; domain 1	455	568	-	-
	Prci6g0340	833	FunFam	Receptor-like protein kinase FERONIA	206	388	-	-
	Prci6g0340	833	FunFam	receptor-like protein kinase FERONIA	457	568	-	-
	Prci6g0340	833	CDD	TM_EGFR-like	404	442	-	-
	Prci6g0340	833	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	613	625	IPR008271	GO:0004672\|GO:0006468
	Prci6g0340	833	Gene3D	-	30	181	-	-
	Prci6g0340	833	Gene3D	-	205	388	-	-
	Prci6g0340	833	ProSiteProfiles	Protein kinase domain profile.	493	766	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci6g0340	833	Pfam	Protein tyrosine and serine/threonine kinase	498	691	IPR001245	GO:0004672\|GO:0006468
	Prci6g0340	833	ProSitePatterns	Protein kinases ATP-binding region signature.	499	521	IPR017441	GO:0005524
	Prci6g0340	833	PANTHER	OS07G0166700 PROTEIN	480	770	IPR045272	GO:0004714\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci6g0340	Prci-Chr6	1991298	1994712	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci6g0340	10	833	Receptor kinase-like Gene Family	AT3G46290	67.028	0.0	1135

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Prci6g0340		Malectin_like	1.3e-39	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci6g0340	-		-	gmx:100806488	1348.95