Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0316 ATGTCTTCCAATTCCGGCATACCTGACGATGATTCTTGGTTTTGGGAGCAACGCAGCGTATCCTCATTTGTCATATTCTCTGCCATCTTCATCATGCTTTCCTTCTACAGCATATTTCAGTGTGTATTCTATAGAAACCCTCGCACTAGTTCCTCAAGAAGCCCCACTTCGAGGTCAAGGGGAGATTTGAACGAGCCAAATCTTGATGATCGTCATTCTATACAGATTCAAGACCGTGCTTTAGAGATGCGTGTCATATCATCTCTTCCGATGTCTCAGTTTAAGAAGAATGAGGCAGAAGAAAAAAGGGGAACCAACATAGAGTGTGCGATATGCTTGGGAGAGTTTGAAGAAGAAGAATGGGTTAAGAGACTTCCTAGCTGTTCGCATGTCTTTCATGTTTCCTGCATAGATACATGGTTTCGCTCTCCTCTCTGTAGATCTTATATCTATCATAATAATCTCGCTCTGTTTCTTACTACACATCGCTAG 492 0.4228 MSSNSGIPDDDSWFWEQRSVSSFVIFSAIFIMLSFYSIFQCVFYRNPRTSSSRSPTSRSRGDLNEPNLDDRHSIQIQDRALEMRVISSLPMSQFKKNEAEEKRGTNIECAICLGEFEEEEWVKRLPSCSHVFHVSCIDTWFRSPLCRSYIYHNNLALFLTTHR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0316 163 Pfam RING-like zinc finger 108 137 IPR001841 -
Prci6g0316 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 151 IPR013083 -
Prci6g0316 163 SMART ring_2 109 146 IPR001841 -
Prci6g0316 163 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 21 150 IPR044675 -
Prci6g0316 163 ProSiteProfiles Zinc finger RING-type profile. 109 147 IPR001841 -
Prci6g0316 163 MobiDBLite consensus disorder prediction 48 69 - -
Prci6g0316 163 MobiDBLite consensus disorder prediction 48 62 - -
Prci6g0316 163 SUPERFAMILY RING/U-box 98 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0316 Prci-Chr6 1809180 1809671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0316 76 150 Rapid Response to Elicitors AT3G16720 48.101 1.46e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0316 - - pcin:129313194 332.413