Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0314 ATGGCGATTGCTAGGATTGCTATCGGAAATGCATCGGAGCTGGGCCAAGCCGATGCTCTCAGGGCTGCTCTGGCCGAGTTCATTTCGATGCTCATCTTTGTGTTCGCCGGGGAGGGCTCCGGCATGGCTTTCAACAAGCTGACGGACAATGGATCGACGACACCAGCAGGGCTGGTGGCGGCATCGTTGGCTCATGGCTTTGCATTGTTTGTGGCGGTTTCAGTCGGCGCCAACATTTCTGGAGGCCACGTGAATCCCGCCGTTACTTTTGGTGCCTTCATTGGGGGCCACATCTCTCTCCTCAGGAGCATTCTGTACTGGATCGCCCAATTGCTTGGCTCTGTCGTTGCTTGCTTACTCCTTAAATTTGCCACTGGTGGACTGGAAACATCAGCTTTCTCGTTATCTTCAGGAGTGGGGGCATGGAACGCGATGGTGTTCGAGATAGTGATGACGTTTGGTCTAGTGTACACGGTGTATGCAACGGCCTTAGACACGAAGAAGGGTGACATTGGGATAATTGCTCCGATTGCGATTGGTTTCATCGTCGGAGCTAACATCTTGGCCGGAGGGGCCTTTGACGGGGCATCCATGAACCCAGCTGTATCTTTCGGGCCAGCCGTTGTGAGCTGGACGTGGGCCAACCACTGGGTTTACTGGCTCGGTCCCTTCCTCGGTGCCGCCATTGCGGCCATTGTTTATGAGATAATATTCATGAACCAGACCACTCATCAACAGCTCCCCACCGCTGACTATTAA 759 0.5402 MAIARIAIGNASELGQADALRAALAEFISMLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAASLAHGFALFVAVSVGANISGGHVNPAVTFGAFIGGHISLLRSILYWIAQLLGSVVACLLLKFATGGLETSAFSLSSGVGAWNAMVFEIVMTFGLVYTVYATALDTKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWLGPFLGAAIAAIVYEIIFMNQTTHQQLPTADY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0314 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Prci6g0314 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0314 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0314 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0314 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0314 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0314 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0314 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0314 252 FunFam Probable aquaporin TIP1-1 4 252 - -
Prci6g0314 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Prci6g0314 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci6g0314 252 SUPERFAMILY Aquaporin-like 18 245 IPR023271 -
Prci6g0314 252 PANTHER AQUAPORIN-8 6 247 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0314 Prci-Chr6 1778420 1779666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0314 1 252 Major Intrinsic Protein MIP AT4G01470 77.778 6.30e-141 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0314 K09873 - mnt:21394129 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2617 7 38249229 38250957 Prci6g0314 6 1778420 1779666 CCT