Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0311 ATGGTTCAACAGGAAATGCGAAAAGGTCCATGGACGGAACAGGAGGACATCAAGCTGGTGTCCTTTGTTGGCTTGTTTGGAGACCGAAGATGGGATTTTATAGCAAAGGTTTCAGGTTTGCATAGAACAGGTAAGAGTTGCAGGTTACGTTGGGTTAATTACCTTCATCCTGGTCTCAAACGTGGCAAGATGACGCCCCAAGAAGAGCGTCTCGTCGTGGAGCTTCACTCCAAATGGGGAAATAGGTGGTCGAGAATCGCTCGCAAATTACCAGGGCGCACAGACAATGAGATTAAGAATTACTGGAGGACTCACATGAGGAAGAAGGCTCAGGAAAAAAAGCGAGCGGCGGCCACTCTATCGCCTTCATCACCAGAATCCTCCAAGAGCAGTACTGGAGAAGAAAGCTTTAATGATTCAGGAGGTCCTAATGACATGGTGTCTTCCACAGGGATACAGATAGGGGAAGATCAAGCATGTGAACAGGAAAGTTACTCTATGGAAGATATATGGAAAGATATTTCTGTGTCAGAAGAGAACAATATTCTGGGGCCGGTCTTCGATGTGCAGAGTGAACTGGGCTGTAACTTGTCTTGTCCTCTCATGCCTTCCCCTTCCTGGGACTACTCTTCAGACTCGCTATGGGTTATGGACGAAGAGGAAAGTAAGATTTTTAACCCAGTTTTTCCCTTTTACGAGCAAGGGACACCATTTCTAACAGGCTAG 726 0.4656 MVQQEMRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLHRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVVELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEKKRAAATLSPSSPESSKSSTGEESFNDSGGPNDMVSSTGIQIGEDQACEQESYSMEDIWKDISVSEENNILGPVFDVQSELGCNLSCPLMPSPSWDYSSDSLWVMDEEESKIFNPVFPFYEQGTPFLTG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0311 241 MobiDBLite consensus disorder prediction 117 150 - -
Prci6g0311 241 FunFam MYB transcription factor 63 132 - -
Prci6g0311 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Prci6g0311 241 MobiDBLite consensus disorder prediction 112 150 - -
Prci6g0311 241 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Prci6g0311 241 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Prci6g0311 241 SUPERFAMILY Homeodomain-like 5 102 IPR009057 -
Prci6g0311 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Prci6g0311 241 SMART sant 7 57 IPR001005 -
Prci6g0311 241 SMART sant 60 108 IPR001005 -
Prci6g0311 241 CDD SANT 63 106 IPR001005 -
Prci6g0311 241 Gene3D - 63 136 - -
Prci6g0311 241 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Prci6g0311 241 Gene3D - 8 60 - -
Prci6g0311 241 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Prci6g0311 241 CDD SANT 10 55 IPR001005 -
Prci6g0311 241 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 116 IPR044676 GO:0003700|GO:0006355|GO:0043565
Prci6g0311 241 FunFam Myb transcription factor 8 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0311 Prci-Chr6 1771072 1772355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0311 1 224 MYB Transcription Factor Family AT5G59780 63.436 3.55e-93 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci6g0311 Myb_DNA-binding 5.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0311 K09422 - qsa:O6P43_028279 321.242