Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0300 ATGTCTCTCCAAAACAAGGGATTTTGGATGGTAAAGGGTGACGAAAAGGAAGCATTTGATCATCCTTCCAAAATTGAACCAAAGCGATCTCGTCACTGGTTTGTTCATTCTGCTGAAATAGATTCTTTACCAAGCAAGAAACAATCTACGGAAGACACTAATGGAAAAGGATTGTCAAATGCCTTTACATCTTGGGAGAGCAATTCTTCTTTTCATCCCGTTCCAATCCAATTTATTGGCCGATCTTTTGGATCTGAAACTAGGTCTGTCAATTTCAGTGAAAAGAAAACTTTTGTTGTGGCTGATGATTTCAATGCACGAACAAAAATGATTTATGGGGAAGATGCCTCCTTTGACTTGTCTATATCTCACTCTGTTCAAGATTCTGGTACATGTCTAGGTTTCAGTGGAATTAAAAAAGTGAAAGTTGATGGTGTTAAAGATCGTGATAACGCACAGGCTTCAGAGGGGCTTAATTATAGCGGACAGAATGTCGGCAATCTTCATCAGGCTTATAACAGAGAACCTGAGGCAAGATCTGTGTCAATGGGGCAAGCCTTTGATATGGAGGGTAGTGTCACATTAATGGGACTCACTTGCAATAGAGAGGAAGCACGTGTTAGATCATTAGATTGCCCTCCTTGCAGAGTAGAGGAGAATGCCATATCTATTAGTGATTCCTCTAATAAAGATGACTCAAATGTAATTTCTTTTCGTGGGTTCCAAGATGAAGAGGATGTCATCCCTGTGAATAGGCCAGCTGGAGACTATAATCCATTATATAATCAATCTTCAGTTGAAGTATCAATAGCAGCTGACAAAACAGAGATGGATGTTTCAAATTCAAATGCAGTTGTAAATTATTCTCAGGTGGCTAAACTTAAGCCCGAGTTTCTGTCCAAAAATAGACCAGAGTACAAAGTAACAAGGAAAGAAGCTTCAAATAGTTTCCCTTCTAACGTTAGAAACCTGATTTCTACTGGTATGCTAGATGGAGTTCCTGTAAAGTACATCTCAGTGGCACGGGAGGAACTCCGTGGAGTTATTAAAGGTTTTGGCTATCTTTGTGGTTGTCAGTCATGTGATTATACCAAGGTTCTAAATGCTCATGAGTTTGAGACACATGCTGGTTGCAAAACAAAACACCCAAACAAGCACATTTACTTTGAGAACGGGAAGACCATTTATCAGATAGTTCAGGAATTGAAGAGTACCCCTGAAAGTTTGTTGGTTGATACAATTCAAACAGTTTTTGGTTCACAAATTAATCAGAAAGCATTTCAAAGTTGGAAAGAATCATTTCAAGCAGCAACCCGTGAGCTTCAGCGCATTTACGGAAAGGAAGTACTAAATATGTAA 1359 0.3907 MSLQNKGFWMVKGDEKEAFDHPSKIEPKRSRHWFVHSAEIDSLPSKKQSTEDTNGKGLSNAFTSWESNSSFHPVPIQFIGRSFGSETRSVNFSEKKTFVVADDFNARTKMIYGEDASFDLSISHSVQDSGTCLGFSGIKKVKVDGVKDRDNAQASEGLNYSGQNVGNLHQAYNREPEARSVSMGQAFDMEGSVTLMGLTCNREEARVRSLDCPPCRVEENAISISDSSNKDDSNVISFRGFQDEEDVIPVNRPAGDYNPLYNQSSVEVSIAADKTEMDVSNSNAVVNYSQVAKLKPEFLSKNRPEYKVTRKEASNSFPSNVRNLISTGMLDGVPVKYISVAREELRGVIKGFGYLCGCQSCDYTKVLNAHEFETHAGCKTKHPNKHIYFENGKTIYQIVQELKSTPESLLVDTIQTVFGSQINQKAFQSWKESFQAATRELQRIYGKEVLNM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0300 452 Pfam Tify domain binding domain 347 402 IPR032308 -
Prci6g0300 452 PANTHER AUTOIMMUNE REGULATOR 16 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0300 Prci-Chr6 1723772 1726891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0300 307 435 PHD Transcription Factor Family AT3G53680 53.077 1.49e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0300 - - gmx:100802229 586.645